| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1287 |
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| Symbol | |
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| ID | 4809539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1564633 |
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| End bp | 1566147 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640106710 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_001037712 |
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| Protein GI | 125973802 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000512156 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAAAA CTCTGTTTAG CAAGATTGTT GTCCTGTTTA TTGCCATTTT GCTTGTAAGC
ACATCCATAA CCGGGGTGAT GCTTTATATT TTTCTTGGAA ATTTTGCCTC GGAGGAAAAG
GAAAAATTAT TAAGTGACAC TGCGGACAGT ATAAACAGTA TGCTGAACGA TTATTTGACT
GCTTATTACA ATAACTATAA CAATCCCATG TTTGCATTCT GGGAGGAAAT ATACCGCAGA
ATGCTGGATA ACGCCCTTGA GAGGGAAAGT CAAAGTACAG GCACTGTCAT ATGGATTGTG
TCCACAGAAG GAGAAATCGG TATTATCAAG GGTAATCAGG CGGTGGTAAG GGAAATAGTC
CAAAAGCTTA CCGACGACAC CGGCAAGATT AAACTGCAAA ACCCGGCACA ATATAAAGAC
GTTATGAGCG GTAGTGTGCC CATGGTCAAA GAAATAGGAG ATTTTTACGG ACTGTTTAAG
GACACGAATG TATCGTGGCT GACTATTGGA AAGCCGTTTA CATATAACGG CAAAATTCTC
GGGGCTGTTT ACCTTCATAC GCCGGTTCCT GAGGTACAGA GGGCAAGAAG CAGTGTTTTT
AAGTTCTTTA TTTTTGCCGT TGTCATTTCC ATAATAATAT CAATAGTACT GATTTATATT
TTTTCACTTA AGCTTTCAAG GCCTTTGAAA AAGATTAACA GTGCTGCAAA GAAAATTGCA
AGCGGAAAAT TTGACGAAAG GCTTGATATT TCATCGGAAG ATGAGATAGG TGAGCTTGCA
AGAAGTTTTA ACAACATGGC GGGAGAGCTT CAGAATCTGG AAAACATGCG AAGAGGTTTT
ATCGCCAATG TGTCCCATGA GCTTAGAACC CCGATGACTT CAATACATGG GTTTATAGAA
GGAATTCTGG ATGGAACCAT TCCTCCGGAA AAGGAAAAGG ATTACCTTTT AATTGTCCGG
GATGAAATAC GAAGGCTCAA CAGGCTGACC ACGGATCTTC TTGACCTTGC AAAAATGGAG
GCCGGTGAAA TCACTATAAA TCCGGTTAAC TTTAATATCA ATGAACTTAT CAGACGATGC
ATTATAAAGC TTGAAAACTT TATAACACAA AAGGACATTG AGGTTGAGGC AAATTTTGAA
GAAGAGGATA TGTATGTAAA AGCGGATATT GACTCCATTG AGAGAGTGCT TATAAATCTT
ATGCACAACG CTGTCAAATT TGTTCAGCAG AACGGAAAAA TCAAAGTATC CACCTCAAGT
TACAAAAACA AGGTACTTGT TTGTGTTGAG GATAACGGCA TAGGAATTGA CAGGAATGAA
ATTGACCTTA TCTGGGAAAG ATTTTACAAG TCGGACAAAT CCAGAAGCAA AGAAAAAGGC
GGTGCCGGCC TTGGACTTGC CATAGTCAGA AACATAATAA ACGACCACAA GCAGGAAATC
TGGGTTGAGA GTGAGGTCGG AAAAGGAACC AAGTTTTATT TTACTTTGGA CAAAGGAAGC
AATGAAAAAG CATAA
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| Protein sequence | MLKTLFSKIV VLFIAILLVS TSITGVMLYI FLGNFASEEK EKLLSDTADS INSMLNDYLT
AYYNNYNNPM FAFWEEIYRR MLDNALERES QSTGTVIWIV STEGEIGIIK GNQAVVREIV
QKLTDDTGKI KLQNPAQYKD VMSGSVPMVK EIGDFYGLFK DTNVSWLTIG KPFTYNGKIL
GAVYLHTPVP EVQRARSSVF KFFIFAVVIS IIISIVLIYI FSLKLSRPLK KINSAAKKIA
SGKFDERLDI SSEDEIGELA RSFNNMAGEL QNLENMRRGF IANVSHELRT PMTSIHGFIE
GILDGTIPPE KEKDYLLIVR DEIRRLNRLT TDLLDLAKME AGEITINPVN FNINELIRRC
IIKLENFITQ KDIEVEANFE EEDMYVKADI DSIERVLINL MHNAVKFVQQ NGKIKVSTSS
YKNKVLVCVE DNGIGIDRNE IDLIWERFYK SDKSRSKEKG GAGLGLAIVR NIINDHKQEI
WVESEVGKGT KFYFTLDKGS NEKA
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