Gene Cthe_1258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1258 
Symbol 
ID4809763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1528544 
End bp1529323 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content37% 
IMG OID640106681 
Productcopper amine oxidase-like protein 
Protein accessionYP_001037683 
Protein GI125973773 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TAAGAGTGTT TTTTTCATAT CTTGTGGTAT TTTGCATTTT GATTATATTT 
AGCTTTACGG GAAGCTTCTC ATTTGCCGTA CAAAACAGTT ATGCTTCGGC GGATGAAATA
AAGGTTTTTC TAAATGGGGT TGAAATTAAG TTTGATGTGG CTCCGTACAT AAAAAACGGA
AGAACGATGG TGCCTTTCAG AGCGATTTTC GAAGCTCTTG GTGTGGATAT AAGCTGGAAC
GGAGTAAACC GTACCATTCT GGCAACCAAT GATACCACCG AGATTTATAT TGAAATAGGG
AAAGCCTTTG CTTATGTCAA CGGATACAAA GTAAATCTTG ATGCTGAGGC TGAGATCGTG
GGAGGAAGAA CTTTTGTTCC GTTACGATTT GTAAGTGAGA ATGCGGGAGC AGATGTTTCC
TGGGACGGTG CCAGAAGAAC GGTTTATATT TCTTATGTTA ACCAAGTACG GGATTTAGGG
GAGAAATCCT ACTTCAGAGA TTTGGAGTTT ACTGTGGACG GATGGGAAAG TGAAGCGGAC
GGAAAAATAT TAAAAGTATA TGGAAAAGTG AATTTGGAAA ACAAGATGCT TATGATAGAG
TTGTATGACA GCTCAAGAAA ATATGTGAGC GGTATAGCGG AAATAACAGG TAAAGACGGT
GGAATGAATT TGTTTGAGGT TAATATTTAC CTGAATGCTT CTTTTAATCC TAAGACTATT
CTTGTAAAGA CACTTGGAGA TTCCAATAAA CCGATTAAAA TTTCACAGTA TAATTTATAA
 
Protein sequence
MKKIRVFFSY LVVFCILIIF SFTGSFSFAV QNSYASADEI KVFLNGVEIK FDVAPYIKNG 
RTMVPFRAIF EALGVDISWN GVNRTILATN DTTEIYIEIG KAFAYVNGYK VNLDAEAEIV
GGRTFVPLRF VSENAGADVS WDGARRTVYI SYVNQVRDLG EKSYFRDLEF TVDGWESEAD
GKILKVYGKV NLENKMLMIE LYDSSRKYVS GIAEITGKDG GMNLFEVNIY LNASFNPKTI
LVKTLGDSNK PIKISQYNL