Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1258 |
Symbol | |
ID | 4809763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1528544 |
End bp | 1529323 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640106681 |
Product | copper amine oxidase-like protein |
Protein accession | YP_001037683 |
Protein GI | 125973773 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TAAGAGTGTT TTTTTCATAT CTTGTGGTAT TTTGCATTTT GATTATATTT AGCTTTACGG GAAGCTTCTC ATTTGCCGTA CAAAACAGTT ATGCTTCGGC GGATGAAATA AAGGTTTTTC TAAATGGGGT TGAAATTAAG TTTGATGTGG CTCCGTACAT AAAAAACGGA AGAACGATGG TGCCTTTCAG AGCGATTTTC GAAGCTCTTG GTGTGGATAT AAGCTGGAAC GGAGTAAACC GTACCATTCT GGCAACCAAT GATACCACCG AGATTTATAT TGAAATAGGG AAAGCCTTTG CTTATGTCAA CGGATACAAA GTAAATCTTG ATGCTGAGGC TGAGATCGTG GGAGGAAGAA CTTTTGTTCC GTTACGATTT GTAAGTGAGA ATGCGGGAGC AGATGTTTCC TGGGACGGTG CCAGAAGAAC GGTTTATATT TCTTATGTTA ACCAAGTACG GGATTTAGGG GAGAAATCCT ACTTCAGAGA TTTGGAGTTT ACTGTGGACG GATGGGAAAG TGAAGCGGAC GGAAAAATAT TAAAAGTATA TGGAAAAGTG AATTTGGAAA ACAAGATGCT TATGATAGAG TTGTATGACA GCTCAAGAAA ATATGTGAGC GGTATAGCGG AAATAACAGG TAAAGACGGT GGAATGAATT TGTTTGAGGT TAATATTTAC CTGAATGCTT CTTTTAATCC TAAGACTATT CTTGTAAAGA CACTTGGAGA TTCCAATAAA CCGATTAAAA TTTCACAGTA TAATTTATAA
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Protein sequence | MKKIRVFFSY LVVFCILIIF SFTGSFSFAV QNSYASADEI KVFLNGVEIK FDVAPYIKNG RTMVPFRAIF EALGVDISWN GVNRTILATN DTTEIYIEIG KAFAYVNGYK VNLDAEAEIV GGRTFVPLRF VSENAGADVS WDGARRTVYI SYVNQVRDLG EKSYFRDLEF TVDGWESEAD GKILKVYGKV NLENKMLMIE LYDSSRKYVS GIAEITGKDG GMNLFEVNIY LNASFNPKTI LVKTLGDSNK PIKISQYNL
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