Gene Cthe_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1250 
Symbol 
ID4809755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp1515028 
End bp1515549 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content44% 
IMG OID640106673 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_001037675 
Protein GI125973765 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0364338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGTGA CCAATGTTGA AAAAAAACCA AAAGTTGCTG TTGTAATGGG GAGTGATTCC 
GATTTTTCAG TTTTACAGAA CTGCATCAAG GTCTTAAAGC AGTTTGATGT GGAGGTTTCG 
GCAATAGTTT GCTCGGCCCA CAGGACACCC GACAAAGCGG CTGAGTTCGC TAAAGGTGCC 
GAAGAAAACG GTTTTGATGT TATAATAGCC GGTGCGGGAA AAGCGGCTCA TTTGCCGGGA 
GTTCTGGCAG CATTTACGCC CCTTCCGGTT ATCGGTGTGC CAATTAAATC ATCTACAATG 
GACGGGCTTG ATTCACTGCT GTCTATAGTT CAAATGCCTT CAGGAATTCC GGTTGCCACG 
GTTGCGATAG ACGGTGCGGA AAATGCTGCT TTGCTTGCGG TTCAGATATT GTCAACTGCT 
TACAAGGATC TCAGGGACAA AATGAAGGAA TATAAAAAGC AGCTTGAGAA AAAGGTTGAA 
GAGAAGAACA AAGCTCTTCA GGAAAAGATA AAAGAACTTT AA
 
Protein sequence
MGVTNVEKKP KVAVVMGSDS DFSVLQNCIK VLKQFDVEVS AIVCSAHRTP DKAAEFAKGA 
EENGFDVIIA GAGKAAHLPG VLAAFTPLPV IGVPIKSSTM DGLDSLLSIV QMPSGIPVAT 
VAIDGAENAA LLAVQILSTA YKDLRDKMKE YKKQLEKKVE EKNKALQEKI KEL