| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1245 |
|---|
| Symbol | |
|---|
| ID | 4809750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 1508881 |
|---|
| End bp | 1510140 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640106668 |
|---|
| Product | phosphoribosylamine--glycine ligase |
|---|
| Protein accession | YP_001037670 |
|---|
| Protein GI | 125973760 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0151] Phosphoribosylamine-glycine ligase |
|---|
| TIGRFAM ID | [TIGR00877] phosphoribosylamine--glycine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.495633 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTAC TGGTTGTAGG AAGCGGTGGC CGTGAGCATG CATTGGTATG GAAAATTGTT
CAAAGTCCCA GGGTGGAGAA AGTGTACTGT GCTCCCGGCA ACGGAGGAAT TTCCGCAATA
GCAGAGTGTG TGCCGATAAA GGCAATGGAT ATAGAGGGAA TTGTAAACTT TTCGAAGGAA
AAGAAAATTG ACATGGTAGT GGTTGCGCCT GACGACCCTC TTGCAGCCGG TATGGTTGAT
GCTCTTGAGG AAGCGGGAAT CAGAGCGTTT GGACCAAACA AGGCGGCGGC CGTGATTGAA
AGCAGCAAGG CTTTTGCGAA AAATCTTATG AAGAAATACA ATATACCCAC TGCCAGATAT
GAAATTTTTG AAAACAGCGC CGATGCCATA AATTATTTAC AGGATCAGAA ATATCCGGTG
GTTGTGAAAG CCGATGGTTT GGCGCTGGGC AAAGGTGTAA TAATTGCACA GAATTTTGAC
GAGGCCAAAC AAGCGGTTCA AAGCATCATG GAGGACAAGG TCTTTGGTGA AGCCGGAAAC
AAGGTGGTAA TTGAAGAGTT TTTGGTGGGT CAGGAGGTAT CAATGCTGGC CTTTACCGAC
GGAAAAACCA TAAAGACCAT GGTTTCCTCC CAGGACCACA AGAGGGCTTT GGACAATGAC
CAGGGGCTTA ATACCGGAGG TATGGGAACA TTTTCGCCCA GCAGGATATA TACAGAGGAA
ATTGACAGGT ACTGCATGGA AAGAATCTAC AAGCCCACGA TTGAGGCTAT GGAGAAAGAA
GGCAGGAAGT TTAAGGGAGT ATTGTACTTT GGGCTTATTA TCACAAAAGA CGGCCCGAAA
GTACTGGAGT ATAATGCAAG ATTCGGAGAT CCGGAGACCC AGGTGGTGCT TCCAAGGCTT
AATACCGACA TAATTGATAT ATTTGAAGCT GTTATTGATG AAAGATTGGA TGAAGTTGAA
ATAAGCTGGA ATGACAGTGC ATGTGTGTGC GTAATCATGG CTTCGGGAGG ATACCCAAAA
GAGTATAAAA CCGGCTATGA GATATCAGGT ATTGAAGATG CGGAAAGAGA TGCCAACATA
GTGGTCTTCC ACGCAGGTAC AAAGCGTGAA AACGGCAAAT ATTACACCGC AGGAGGACGT
GTGCTGGGAG TTACGGCCAT GGAAAACACT TTGGATGAGG CAATAAAGAA GGCTTACGAG
GGCGTAGGAA AGATTAAGTT CCAGGATATG CACTATCGAA AGGATATAGG AAAAAAGTAG
|
|---|
| Protein sequence | MKVLVVGSGG REHALVWKIV QSPRVEKVYC APGNGGISAI AECVPIKAMD IEGIVNFSKE
KKIDMVVVAP DDPLAAGMVD ALEEAGIRAF GPNKAAAVIE SSKAFAKNLM KKYNIPTARY
EIFENSADAI NYLQDQKYPV VVKADGLALG KGVIIAQNFD EAKQAVQSIM EDKVFGEAGN
KVVIEEFLVG QEVSMLAFTD GKTIKTMVSS QDHKRALDND QGLNTGGMGT FSPSRIYTEE
IDRYCMERIY KPTIEAMEKE GRKFKGVLYF GLIITKDGPK VLEYNARFGD PETQVVLPRL
NTDIIDIFEA VIDERLDEVE ISWNDSACVC VIMASGGYPK EYKTGYEISG IEDAERDANI
VVFHAGTKRE NGKYYTAGGR VLGVTAMENT LDEAIKKAYE GVGKIKFQDM HYRKDIGKK
|
|---|
| |