Gene Cthe_1239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1239 
Symbol 
ID4809931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp1503163 
End bp1503759 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content39% 
IMG OID640106662 
Producthypothetical protein 
Protein accessionYP_001037664 
Protein GI125973754 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGA AAAAGGTGAG GAGGAAAAAG AAAAACAGAG GCTCCGGTTT TTTTAGTGTT 
GTACTGTTTT TACTTTTGGC AGCAGGTTGT TATTTCTACT TTTTTAAAAA CTCTTCGGTG 
GAAGTTGACA ACAATTTCGA TGCATTAATG GCAAGAATTA TGAAAACGGA GACTACTCCT 
GCGGCCACAA GTCCTTCACC TGCAGTAAAC ACTGCAGAAA GCACTCCAGG TGTGGAGCCG 
GTTACTTCTG CTTCTGCGGA GAAGTTAAGC ACGGAGAGTC CTCAGGAGAC TGAGAATATT 
CAAGAGACGC CGGTTGTTAT TCAGCAAAAA GGTGCAAGCA TACATGTAAT AAACTATACC 
GGACAAAAAA ATCTTGGAGA AGAAATCAGG ACGACCCTTG AAAACTATGG TTTTGTAGTA 
AGTTTGGGCA ACGGAAGCTC TTTAAAACAT GTCAGCTCTG CAATTATTGA GAAGAAAGAA 
AACGTATCGG GAGAGGAATT GGGAAACCTG TTAAATATAA AAAGAATCAG AAAGGAAATT 
GACCCAAGTT CACGATTTGA TTTTATAATA ATACTTGGAG ATGACTTTAA TCCTTGA
 
Protein sequence
MAKKKVRRKK KNRGSGFFSV VLFLLLAAGC YFYFFKNSSV EVDNNFDALM ARIMKTETTP 
AATSPSPAVN TAESTPGVEP VTSASAEKLS TESPQETENI QETPVVIQQK GASIHVINYT 
GQKNLGEEIR TTLENYGFVV SLGNGSSLKH VSSAIIEKKE NVSGEELGNL LNIKRIRKEI 
DPSSRFDFII ILGDDFNP