| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1230 |
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| Symbol | |
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| ID | 4809922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1472107 |
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| End bp | 1472997 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640106653 |
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| Product | helix-hairpin-helix repeat-containing competence protein ComEA |
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| Protein accession | YP_001037655 |
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| Protein GI | 125973745 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.890666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTGAGGG ATTTTTTTAA TCAGGAAGTA AGTATGAAAA AAGGAATAGT TGGGCTCATG
ATATTGGGAT TGATTGTAAC TACTTCGGTT ACGGGATTTC TTCTTGCAAA TGACGGTGAG
GATATAATTA TAAGCAAGGC GAAAGCCGGT CAATATACCG TGGAAGCGGA AAACGGTGAG
GAAAAGACAA CGGAAAAATT GGTTCAGGAG AAAGAAGAAG CTGCAGATGA AATAAAGGTG
TATGTTGTCG GTGAGGTTAA CAAACCCGGT GTGGTTACAC TGAAAAAAGG TCAGATAATA
CAAGATGCCA TTGAACTTGC CGGAGGTCCC ACAGAGGATG CGGATATTGA GAATATAAAT
TTGGCTTATG AGCTCCGGGA GAATGTTATG ATAAGGGTAA TGTCCAAAAG TGAGACTACA
GGGCAGGATA TTGGTGAAGA AGGCGATATG CAGGTTGCTG CGGGCAATAC TGAAAATAAA
AGTACGGCTG CAGGAAGCAA TTCAACCAAG AATAGTCAGT CGAAGAATGT TTCCGGCGGA
ACAAGCAAAA ACAGTTCAGG CTCAAATGAT GCAAAAAGCA ATTCGGGAAA AAGCACCAAC
AATGGGGGTG TTTCAGGAAT AGCCGTTACA AAGGACAGCG GCGGGGCGGT AGTCGGAGAA
AATGCAAGTA GTAGTGAAAA CAGCAAGACT GCAAATTCAA AAATCAATAT AAATACTGCA
ACTGTGGAGG AACTTGATTC TCTCCCGGGA ATCGGGCCGG CCATTGCGGC CAAAATAGTG
GCTTATCGCG AGCAGAACGG CAAATTTAAA TCAATAGAAG ACATAATGAA TGTCTCAGGA
ATAGGCCAGA GTAAATTCAA CAATATCAAG GACTTTATTA CGGTAAACTG A
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| Protein sequence | MLRDFFNQEV SMKKGIVGLM ILGLIVTTSV TGFLLANDGE DIIISKAKAG QYTVEAENGE
EKTTEKLVQE KEEAADEIKV YVVGEVNKPG VVTLKKGQII QDAIELAGGP TEDADIENIN
LAYELRENVM IRVMSKSETT GQDIGEEGDM QVAAGNTENK STAAGSNSTK NSQSKNVSGG
TSKNSSGSND AKSNSGKSTN NGGVSGIAVT KDSGGAVVGE NASSSENSKT ANSKININTA
TVEELDSLPG IGPAIAAKIV AYREQNGKFK SIEDIMNVSG IGQSKFNNIK DFITVN
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