Gene Cthe_1229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1229 
Symbol 
ID4809921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp1471331 
End bp1471948 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content44% 
IMG OID640106652 
Productspore germination protein-like protein 
Protein accessionYP_001037654 
Protein GI125973744 
COG category[R] General function prediction only 
COG ID[COG5401] Spore germination protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0403693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAA TTTTAACATT AATTGCAGCT TTGACCATTC TTGTGTTTGC GGCAGGGTGC 
AGCCTTTCCG GAGGAACAGG TACGGGACAG GCCGGCAATG AACAACAGCA GCAAAGCGAT 
GAAGGTAACG GTAGTGAAAT TCAGGAACCG GATTTGGAGA AAGAATCTGA GAAAGGATCC 
GAGGAGGAAC CTGAGGAAGA GGAAACATTG ACTGTAATGG TATATTTCGG TGACTTTCAA 
TCAGAAAAGG TGGCTCCCGA GACAAGGACA GTGAAAGTAA AGGCTGGGGA CAGCATTGAA 
AAGGTAGTTT TTGAGGAACT TGCAAAAGGT CCCGAAACAG AAGGATTGGA TCCTGTTATT 
CCCGAGGGCA CAAAGTTATT GTCGGTCAGG ACCGAAAACG GAATTTGCAC GGTTAATTTG 
TCGAAAGAGT TTGTTGAAAA TCATATAGGA GGTTCCACTG CCGAGCTTAT GACCATTAAC 
TCGATTGTTG CTTCGCTTAC GGAACTTCCG GGCATAGACA AGGTTCAGTT TTTAATAGAG 
GGCAATGTCA GGGAGGTTTT TATCCATGAA GCCCTGGATA CTCCAATCAA AAGAAATGAA 
AGTTTTATAA AGAAATGA
 
Protein sequence
MKRILTLIAA LTILVFAAGC SLSGGTGTGQ AGNEQQQQSD EGNGSEIQEP DLEKESEKGS 
EEEPEEEETL TVMVYFGDFQ SEKVAPETRT VKVKAGDSIE KVVFEELAKG PETEGLDPVI 
PEGTKLLSVR TENGICTVNL SKEFVENHIG GSTAELMTIN SIVASLTELP GIDKVQFLIE 
GNVREVFIHE ALDTPIKRNE SFIKK