Gene Cthe_1219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1219 
Symbol 
ID4809911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1453364 
End bp1454458 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content40% 
IMG OID640106642 
Producthypothetical protein 
Protein accessionYP_001037644 
Protein GI125973734 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.039484 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCAA AAATCAATAA AAAACTGTTT TTTATCCTTC TTATTCCCCT GGCGTACCTA 
ATACAGTTTC TCTCCTCCAG GGCTTCCGGC CTTGCGGAAA AAATTTATTC AAGAGGTGTT
TACAGAATAA TTGCAAGATT TTTAAATCTA ATTTCAGGCC ATATACCCGT ATCCATTGCA
GAAATACTGG TAGTGCTCTC TATTTTGTTT GCATTGTTTT ACATTGTAAA GACAATTATC
AGGATGATAA AATCCTCATC AAAAGCTTTT AAAATTTTAT GCAACGCCCT CGTCAACATC
CTTACCGCCG TAAGCCTGCT GTACTTTGGC TTTATGCTGC TGTGGGGAAT CAACTATCAA
AGGCTTCCTT TTTCCCAAAT TGCCAATTAC GACACAAGTC CCGCCTCCAC AGATGAATTG
CTTGAGGTAT GTAAAAGTCT TATGGAGCAC GCAAATAGGC TTAGAAAACA TGTTGAGGAA
GACAACAACG GGGTTATGAA ACTTTCAGCC AGCGTAAATG AAACATTGAA AAGAGCCTGT
TTAGGTTATG AAGCTGCTTC CAAAACATAC CCGGAGCTTC ATCACAATTA TGGAAGGCCA
AAGGGAGTAA TACTGTCCGA AGTAATGTCC TATCTTGGCA TCGGAGGAGT TTATTTCCCC
TTTACAGGAG AAGCAAACGT AAATATTTCG ATGCCCCATA CTTCAATTCC TTTCACCGCT
TGCCACGAAA TGGCCCATCA AATAGGTTTT GCCAGAGAAG ACGAGGCAAA CTTTATAGCC
TATATTGCAT GTAAAAATCA TCCCTCACCG GATTTTCAGT ATTCCGGAAT TTTATCAGCT
CTTATAAATG CCACCAATAC CCTATACCGC TACAACCGGG ACGAGTATTT TAAATTGAGA
AACAGTTTTA GTGAAGGTGT AATCCGCGAC CTTGACGCTT TAAACATCTA CTGGGAAAAA
TACGACACTC CCATAGAAGA TTTCTCATCC TCGGTAAACA ACACCTACCT TAAGGCAAAC
ATGCAGCAAG ACGGAGTAAG AAGTTACGGA AGAATGGTTG ATCTCCTTAT CGCAGAATAC
AGAAGCCGGA AATAA
 
Protein sequence
MNAKINKKLF FILLIPLAYL IQFLSSRASG LAEKIYSRGV YRIIARFLNL ISGHIPVSIA 
EILVVLSILF ALFYIVKTII RMIKSSSKAF KILCNALVNI LTAVSLLYFG FMLLWGINYQ
RLPFSQIANY DTSPASTDEL LEVCKSLMEH ANRLRKHVEE DNNGVMKLSA SVNETLKRAC
LGYEAASKTY PELHHNYGRP KGVILSEVMS YLGIGGVYFP FTGEANVNIS MPHTSIPFTA
CHEMAHQIGF AREDEANFIA YIACKNHPSP DFQYSGILSA LINATNTLYR YNRDEYFKLR
NSFSEGVIRD LDALNIYWEK YDTPIEDFSS SVNNTYLKAN MQQDGVRSYG RMVDLLIAEY
RSRK