| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1211 |
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| Symbol | |
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| ID | 4809903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1445603 |
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| End bp | 1446967 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640106634 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001037636 |
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| Protein GI | 125973726 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000141811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAA AAGATGTAAC CAAGGTAGTT TTAGATGAGT CGGATATTCC AAAGCAATGG
TACAATATTT TGGCAGACAT GCCCAACAAG CCCGCACCTT ACTTCAGCTC AAAAACCGGC
AAACCGGTTA CGTTGGACGA ACTTCAGGCA ATTTTCCCGA TGGAACTGAT TCAACAGGAA
AATTCCCAGG AGAGATGGAT TGACATTCCG GAAGAAGTAA GAGAAATGTA CCGTCAATGG
AGACCGAGTC CGTTGTACAG GGCTAGGGCT CTGGAAAAGC ATTTGGGGAC TCCTGCCAGA
ATCTATTACA AATATGAAGG AACGAACGCA ACCGGAAGCC ACAAGCTTAA CACTTCATTG
CCGCAGGCTT ATTACAACAA GATTGCCGGC ATAAAAAGAC TTTCAACGGA GACCGGCGCA
GGACAGTGGG GAAGTGCACT GAGCCTTGCA TGCAATCATT TCGGACTTGA GTGTACGGTT
TACATGGTTA AGGTAAGTTA TGAGCAAAAG CCCTACAGAC GTTCTTTCAT GAAAACTTTC
GGAGCCCAGG TGTATGCAAG TCCTACCAAT CTTACAAGCA GCGGCAGGGC GATTTTGGAA
AAAGATCCTG ATTGTACCGG AAGTCTCGGT ATTGCGATAA GTGAAGCTGT TGAAGATGCG
GCTACGCACG ATGATACCAA TTATGCCTTG GGAAGTGTTT TAAATCACGT ATGTTTGCAT
CAGACCATTA TCGGTCTTGA GGCCAAGAAG CAGTTGGAAT ATCTGGATGA ATACCCTGAT
GTGGTCTTTG CCTGCTGCGG CGGAGGATCA AACTTTGCCG GAATAGCTTT TCCGTTCCTG
ATGGACAAGT TTAAGGGAAC AAAAGTGAGA GCAGTGGCTG TTGAACCGAC TGCATGCCCC
ACTCTCACAA AAGGTGTGTA TGCTTATGAT TATTCCGACA CGGGAAAGAT CGGTCCGTTG
GCAAAGATGT ATACGGTTGG TCATGACTTT GTACCTGCCG GTATCCATGC AGGCGGGTTG
AGATATCACG GAGTTTCACC AATAGTCAGC CAGCTTTATG AGGATAAGTT GATTGAAGCA
AAAGCTTACG GACAGAGTTC GGTTTTTGAA GCGGCTGTTA TTTTTGCAAG AACGGAAGGA
ATTGTTCCCG CTCCTGAGTC TTCCCATGCA ATAAGGGCTG CTATTGACGA AGCCCTGTTG
TGCAAAGAAT CGGGAGAGGC GAAAGTTATT CTGTTTAATT TGAGTGGACA CGGATATTTT
GACATGGCCG CTTATGACAA CTACTTTAGC GGAAAACTTA GTGACGTGGA TTATTCGGAA
GAGGAAATTG CAAGAAGTAT GAAAAATTTG CCAAAGGTTG ACTAA
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| Protein sequence | MSKKDVTKVV LDESDIPKQW YNILADMPNK PAPYFSSKTG KPVTLDELQA IFPMELIQQE
NSQERWIDIP EEVREMYRQW RPSPLYRARA LEKHLGTPAR IYYKYEGTNA TGSHKLNTSL
PQAYYNKIAG IKRLSTETGA GQWGSALSLA CNHFGLECTV YMVKVSYEQK PYRRSFMKTF
GAQVYASPTN LTSSGRAILE KDPDCTGSLG IAISEAVEDA ATHDDTNYAL GSVLNHVCLH
QTIIGLEAKK QLEYLDEYPD VVFACCGGGS NFAGIAFPFL MDKFKGTKVR AVAVEPTACP
TLTKGVYAYD YSDTGKIGPL AKMYTVGHDF VPAGIHAGGL RYHGVSPIVS QLYEDKLIEA
KAYGQSSVFE AAVIFARTEG IVPAPESSHA IRAAIDEALL CKESGEAKVI LFNLSGHGYF
DMAAYDNYFS GKLSDVDYSE EEIARSMKNL PKVD
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