Gene Cthe_1206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1206 
Symbol 
ID4809898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1439291 
End bp1440361 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content36% 
IMG OID640106629 
Productintegrase catalytic subunit 
Protein accessionYP_001037631 
Protein GI125973721 
COG category[L] Replication, recombination and repair 
COG ID[COG2826] Transposase and inactivated derivatives, IS30 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTAC AATATAAGTC TACCACAACT GAGCATAAGT TTAAACACTT AAGTGTTTAT 
GAAAGAGGGC AGATTGCAGC TCTTTTAAAA GAAGGAAAGA GTCAACGTTA TATTGCTAAT
AAACTAGGTC GCTCGCCAAG TACAATTAGC CGTGAAATTA AAAGAGGGAC AACAATGCAG
ATGAGAACTG ATTTATCGAC ATACAAAGTA TATTTTCCTG AAACAGGGCA GGCAGTTTAT
GAGAAAAATC GTATGAATTG CGGAGCAAAG CGTAAATTGG CTCAAGTTGA AGATTTTCTT
AAGTTTGCAG AAGATAAGAT ACTACGCGAA AAATGGTCTC CAGATGCAGT TGTTGGTTTA
TGTAGGAGAG ACCCCAAGTG GCAAAATTCT ACTATTGTAT GTACCAAAAC ACTGTATAAT
TATATAGACC TGGGACTCAT AAAAGTACGA AATATAGATT TAAATCTTAA ACTACGTTTA
AAATCTAAAA TAAAAAGGAT ACGTCAAAAC AAACGGGTTG TAGGGAAAAG CATTGATCAA
AGGCCGGAAG AAGTACAATC ACGTCAAACC TTTGGGCATT GGGAAATTGA TACGGTAACA
GGCAAAAAGT CTAACGATTC AGTAATTTTA ACCTTAACTG AACGAAAAAC CCGCTACGAG
TTATTGTTTC TTTTGGACGC AAAAGACAGT AATACTGTTA ACGAGGCACT TTCAGAACTT
AAGAATTGTT ATGGTAAGGA TGTTTCAAAT GTATTTCGCA CTATAACGGC AGACAATGGT
TCTGAATTTA GTAGACTATC CGAAATGTTA CAAGGGCTAG GAATTGAAGC TTATTTCACT
CATCCTTATT CCTCATGGGA GAGAGGAACT AATGAACGTC ATAATGGACT TATTAGGCGT
TTTATTCCTA AAGGAAAGGC TATAAAAGAT TTTTCTGAAG AAACGATAAA ACGGATACAA
CAATGGTTAA ACAGCCTTCC ACGAAGGATA TTAGGTTACA AAACACCTGA AGAATGTTTT
AATGAAGAGA TACATAACCT GGTAAACAAA AATATATCAG CAATAGCCTG A
 
Protein sequence
MAVQYKSTTT EHKFKHLSVY ERGQIAALLK EGKSQRYIAN KLGRSPSTIS REIKRGTTMQ 
MRTDLSTYKV YFPETGQAVY EKNRMNCGAK RKLAQVEDFL KFAEDKILRE KWSPDAVVGL
CRRDPKWQNS TIVCTKTLYN YIDLGLIKVR NIDLNLKLRL KSKIKRIRQN KRVVGKSIDQ
RPEEVQSRQT FGHWEIDTVT GKKSNDSVIL TLTERKTRYE LLFLLDAKDS NTVNEALSEL
KNCYGKDVSN VFRTITADNG SEFSRLSEML QGLGIEAYFT HPYSSWERGT NERHNGLIRR
FIPKGKAIKD FSEETIKRIQ QWLNSLPRRI LGYKTPEECF NEEIHNLVNK NISAIA