Gene Cthe_1191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1191 
Symbol 
ID4810143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1419635 
End bp1420279 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content32% 
IMG OID640106613 
ProductHAD family hydrolase 
Protein accessionYP_001037616 
Protein GI125973706 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAATA CACTGGTATT TGATTTTGAC GGGACAATAG CTGATTCGTT GGGAGTTGGA 
ATTGATGTAT ATAATGAAAT AGCCGAGGAA TACAATTTTA AAAAGTTAAA TCCGTCGGAT
TTTGCGAAGC TGGGCAAATT GCCGATAGCG AAAAAGTGCA ATGTTCTTGG CATATCTTTG
AGACAGATAC CTTTATTGGT ACACAAGCTA AATGAGAAAT TTAAAGATAA TGTATCCAGG
GTTAAAGTTT TTGATAAAAT GAAAGAGGTA TTATATACTC TTGAAAAAGA AAAATATAGT
TTACATATTA TATCGTCAAA TACTGAAAAT ACAATAAAAG AGGTATTACA GAAAAATAAT
TTGGATATAT TTGAAAGTAT TTATTCTTCA AGAAATATTT TTGGAAAACA CCACAGTATA
AATGATTTTA TCAAAAAAAA CGGCCTTCAT AACGACGAGA TAATATACAT AGGCGACGAG
CTCAGAGACA TTGAGGCATG CAAGAAAGCC AAAGTGAAGA TAATTTCCGT CACATGGGGT
TTTGAGTCAG CAGACCTTCT GTTAACCGGA AATCCGGATT TTTTGGCTAA AGACCCTGAA
GACATAATAA GAATAATTAA AACAATAAAT ACAGTGAATC CATAA
 
Protein sequence
MVNTLVFDFD GTIADSLGVG IDVYNEIAEE YNFKKLNPSD FAKLGKLPIA KKCNVLGISL 
RQIPLLVHKL NEKFKDNVSR VKVFDKMKEV LYTLEKEKYS LHIISSNTEN TIKEVLQKNN
LDIFESIYSS RNIFGKHHSI NDFIKKNGLH NDEIIYIGDE LRDIEACKKA KVKIISVTWG
FESADLLLTG NPDFLAKDPE DIIRIIKTIN TVNP