Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1191 |
Symbol | |
ID | 4810143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1419635 |
End bp | 1420279 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640106613 |
Product | HAD family hydrolase |
Protein accession | YP_001037616 |
Protein GI | 125973706 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAAATA CACTGGTATT TGATTTTGAC GGGACAATAG CTGATTCGTT GGGAGTTGGA ATTGATGTAT ATAATGAAAT AGCCGAGGAA TACAATTTTA AAAAGTTAAA TCCGTCGGAT TTTGCGAAGC TGGGCAAATT GCCGATAGCG AAAAAGTGCA ATGTTCTTGG CATATCTTTG AGACAGATAC CTTTATTGGT ACACAAGCTA AATGAGAAAT TTAAAGATAA TGTATCCAGG GTTAAAGTTT TTGATAAAAT GAAAGAGGTA TTATATACTC TTGAAAAAGA AAAATATAGT TTACATATTA TATCGTCAAA TACTGAAAAT ACAATAAAAG AGGTATTACA GAAAAATAAT TTGGATATAT TTGAAAGTAT TTATTCTTCA AGAAATATTT TTGGAAAACA CCACAGTATA AATGATTTTA TCAAAAAAAA CGGCCTTCAT AACGACGAGA TAATATACAT AGGCGACGAG CTCAGAGACA TTGAGGCATG CAAGAAAGCC AAAGTGAAGA TAATTTCCGT CACATGGGGT TTTGAGTCAG CAGACCTTCT GTTAACCGGA AATCCGGATT TTTTGGCTAA AGACCCTGAA GACATAATAA GAATAATTAA AACAATAAAT ACAGTGAATC CATAA
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Protein sequence | MVNTLVFDFD GTIADSLGVG IDVYNEIAEE YNFKKLNPSD FAKLGKLPIA KKCNVLGISL RQIPLLVHKL NEKFKDNVSR VKVFDKMKEV LYTLEKEKYS LHIISSNTEN TIKEVLQKNN LDIFESIYSS RNIFGKHHSI NDFIKKNGLH NDEIIYIGDE LRDIEACKKA KVKIISVTWG FESADLLLTG NPDFLAKDPE DIIRIIKTIN TVNP
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