Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1186 |
Symbol | |
ID | 4810138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1415157 |
End bp | 1416092 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640106608 |
Product | Alpha/beta hydrolase fold-3 |
Protein accession | YP_001037611 |
Protein GI | 125973701 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0657] Esterase/lipase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.102278 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACCCTT ATAAAAGAAT AGCTTTGAAA GCTTTGTCTC ATTGGGGCAG AAACTTAAAG AAAAATTACA GGGTTTACCG CAGGTTTACC AATGTGGTAA GTGTCTGCAC CGGACACGGG TGCAGAATAG CGGACCTCGA AGTTGCGGCA GGTGACAGGA ACATTCCTGT GCGACTTTTC CATCCAGATG ATCCGGCTTT GGGTGTTTTG ATTTTTTTCC ATGGCGGCGG ATGGGTGACA GGAAATGTTG ATTCATACAC TCATGTTTGC TCCAACATGG CAAATCAAAC GAAGAACATT GTTGTTTCGG TAGATTATCG GTTGGCACCG GAGCATCCCT TTCCTTCAGG ACTTGAGGAT TGCTATGATG CCACAAGAGA ATTCTTCAAA AATCCTGGTT TGTTAAATTG CAAAGCTGAC GATATCACAT TAATCGGCGA CAGCGCAGGT GGAAATCTGG CTGCCGCGGT TTCATTGATG GCAAGAGACA GGGGCGAGTT TTTACCCAAA AGGCAAATAC TGATATATCC GTCCACATAT AATGATCATT CGGAAAATTC CCCGTTTCCT TCAATAAGGG AAAACGGAAC GGGATATTTG CTGACTTCCG AAGAAATTCA AAATTATATG GATATGTATG CTCCAAACAT TGAGGACAGA CAGAGTCCCT ATCTTGCACC CCTGCTGGCC AGGGACTTGT CAAATCAGCC CGATACATTG ATTATTACTG CTGAATATGA TCCTTTAAGA GATGAGGGGG AGGCATACGG AATGCGATTG AAAGAATATG GAAACAACGT AAAGATGTAT CGTATAAAAG GTGCACTCCA TGGATTCTTT TCTATTCCAT GGAAATCTCA ACATGTGAGT CGAAGCTTTG AGATTATTAA CTGGTTTTTA AACAGCTACA ATGGGCAAAG TGAGGAATTG CTATGA
|
Protein sequence | MNPYKRIALK ALSHWGRNLK KNYRVYRRFT NVVSVCTGHG CRIADLEVAA GDRNIPVRLF HPDDPALGVL IFFHGGGWVT GNVDSYTHVC SNMANQTKNI VVSVDYRLAP EHPFPSGLED CYDATREFFK NPGLLNCKAD DITLIGDSAG GNLAAAVSLM ARDRGEFLPK RQILIYPSTY NDHSENSPFP SIRENGTGYL LTSEEIQNYM DMYAPNIEDR QSPYLAPLLA RDLSNQPDTL IITAEYDPLR DEGEAYGMRL KEYGNNVKMY RIKGALHGFF SIPWKSQHVS RSFEIINWFL NSYNGQSEEL L
|
| |