Gene Cthe_1186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1186 
Symbol 
ID4810138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1415157 
End bp1416092 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content43% 
IMG OID640106608 
ProductAlpha/beta hydrolase fold-3 
Protein accessionYP_001037611 
Protein GI125973701 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.102278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCTT ATAAAAGAAT AGCTTTGAAA GCTTTGTCTC ATTGGGGCAG AAACTTAAAG 
AAAAATTACA GGGTTTACCG CAGGTTTACC AATGTGGTAA GTGTCTGCAC CGGACACGGG
TGCAGAATAG CGGACCTCGA AGTTGCGGCA GGTGACAGGA ACATTCCTGT GCGACTTTTC
CATCCAGATG ATCCGGCTTT GGGTGTTTTG ATTTTTTTCC ATGGCGGCGG ATGGGTGACA
GGAAATGTTG ATTCATACAC TCATGTTTGC TCCAACATGG CAAATCAAAC GAAGAACATT
GTTGTTTCGG TAGATTATCG GTTGGCACCG GAGCATCCCT TTCCTTCAGG ACTTGAGGAT
TGCTATGATG CCACAAGAGA ATTCTTCAAA AATCCTGGTT TGTTAAATTG CAAAGCTGAC
GATATCACAT TAATCGGCGA CAGCGCAGGT GGAAATCTGG CTGCCGCGGT TTCATTGATG
GCAAGAGACA GGGGCGAGTT TTTACCCAAA AGGCAAATAC TGATATATCC GTCCACATAT
AATGATCATT CGGAAAATTC CCCGTTTCCT TCAATAAGGG AAAACGGAAC GGGATATTTG
CTGACTTCCG AAGAAATTCA AAATTATATG GATATGTATG CTCCAAACAT TGAGGACAGA
CAGAGTCCCT ATCTTGCACC CCTGCTGGCC AGGGACTTGT CAAATCAGCC CGATACATTG
ATTATTACTG CTGAATATGA TCCTTTAAGA GATGAGGGGG AGGCATACGG AATGCGATTG
AAAGAATATG GAAACAACGT AAAGATGTAT CGTATAAAAG GTGCACTCCA TGGATTCTTT
TCTATTCCAT GGAAATCTCA ACATGTGAGT CGAAGCTTTG AGATTATTAA CTGGTTTTTA
AACAGCTACA ATGGGCAAAG TGAGGAATTG CTATGA
 
Protein sequence
MNPYKRIALK ALSHWGRNLK KNYRVYRRFT NVVSVCTGHG CRIADLEVAA GDRNIPVRLF 
HPDDPALGVL IFFHGGGWVT GNVDSYTHVC SNMANQTKNI VVSVDYRLAP EHPFPSGLED
CYDATREFFK NPGLLNCKAD DITLIGDSAG GNLAAAVSLM ARDRGEFLPK RQILIYPSTY
NDHSENSPFP SIRENGTGYL LTSEEIQNYM DMYAPNIEDR QSPYLAPLLA RDLSNQPDTL
IITAEYDPLR DEGEAYGMRL KEYGNNVKMY RIKGALHGFF SIPWKSQHVS RSFEIINWFL
NSYNGQSEEL L