| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1175 |
|---|
| Symbol | |
|---|
| ID | 4810127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 1402529 |
|---|
| End bp | 1403338 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640106597 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001037600 |
|---|
| Protein GI | 125973690 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1723] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAG TTCATTTTAT AAGTTACAAA GTCGCAGCAT CTCTTCCTTT AGACAAGATA
GCCGCTTTCC TCAAAACCAA TATGAAATTT ACATGGGATG AATACATAGT GGTAGGCGGT
GAACAACTTG ACACAATTTT AAAATATCAC AGCGAAGACA AGGCCGTATA TCTTTTCAAA
TACGGCTGCA TTTCCTTTGT CAATTTTACG GATAAAGAAA TTTACAGCTT TCTTAAATAC
CTGGAATCAA TAACGTCGAG AATAAACTAC AACCTGATGC CCAGGTACCA CGAAAGCCAC
AATGTCACAA TTGATGAAAA CTTAAAATGC AGTCTTTTTG AAAACAAAAG CGTAGAGGTT
GATTATGACA AAAACATAGA CCACATTTTG TCCATCGTGC TGGCCCGTTC AACACAAATG
CTCTTTTTTG AAACACAGGT TAATAATCTG CTGGACAGCG CGGAAAAATT CGTCATTTTG
CTGCAGAAAG GGCGTCTATT AACCTTTACT AAAAAATCTT ATGCCATAAT GGCCAAAATT
CTGAGGTTTG AATTTGACAG TTTAAGTTGT ATCAGAATTT TTGAACATCC CGCCCTTGGC
AAACACAGTA TAAAATTAAA AGAAATATAT GATATTCTTG CAGAATATTA CGAATTTGGC
GGCCGATTCA ACGTAATGCA AAGTAAAATA AAAGACCTGA GAAAAATAGT GGGCATGTAT
TCATCGCTAA GCTACAGCGA AACCGAAACC CGCCTGCTTT TGTTTGAAAT ATTTCTGCTT
TCTTTGTTTT CATTGGCCCA TATCATATAG
|
|---|
| Protein sequence | MKTVHFISYK VAASLPLDKI AAFLKTNMKF TWDEYIVVGG EQLDTILKYH SEDKAVYLFK
YGCISFVNFT DKEIYSFLKY LESITSRINY NLMPRYHESH NVTIDENLKC SLFENKSVEV
DYDKNIDHIL SIVLARSTQM LFFETQVNNL LDSAEKFVIL LQKGRLLTFT KKSYAIMAKI
LRFEFDSLSC IRIFEHPALG KHSIKLKEIY DILAEYYEFG GRFNVMQSKI KDLRKIVGMY
SSLSYSETET RLLLFEIFLL SLFSLAHII
|
|---|
| |