Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1167 |
Symbol | |
ID | 4810119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1391755 |
End bp | 1392639 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640106589 |
Product | radical SAM family protein |
Protein accession | YP_001037592 |
Protein GI | 125973682 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000619352 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGAGTG GTAATATGGA AGCAGCAAAG CCGGCGATGT TTTACGATAA AGGAGAGGAT CTAAAAGTAC ATTGCCGTCT CTGCCCCCAC AATTGTACTA TAAGTCCCGG AAATTTGGGA GTTTGCAGGG CGCGGAAAAA TATTGACGGA GATTTGTATT CTTTAAATTA TGGGAAGATT TCTTCCATTG CGCTGGACCC TATAGAAAAA AAGCCCCTGT ACAGATTTAA AAGTGGTTCG AAGATATTGT CAATAGGCAC TTTTGGATGC AATCTCAAAT GTTCTTTTTG CCAGAATTGG GAGATTGCCC ATGATAATCC CAGGCTTTAT GAAGTGACAT CCGAAACTGT TGTCAGCAAG GCAAAGGAGC TTGTATCTGA AGGTAATATA GGGATTGCAT ATACCTACAA CGAACCCACT ATATGGTATG AGTTTGTGTA TGATACGGCG GTACTTGCAA AAGAGGAAGG CCTTTCAAAT GTTTTGGTGA CCAACGGATT TATCGGCAGG GAAGCGCTTT TAATGCTGCT TCCTTATATT GATGCCATGA ACATAGATGT AAAAGCTTAC ACAGCCTCTT TTTACAAAAA TATATGCGGG GGTGTTTTGG AGAATGTGAA AGAAACTGTG GAGCTGGCGG CCGAAAAATG CCATGTGGAA GTAACCACCC TTGTTATTCC CACATTGAAT GACGAGTTAA AAGAAATTTC CGAAATTGCA AAGTGGCTTT CATCCATATC AAGGAAGATA CCTCTGCATC TTTCAAGGTA TTTTCCAAAT TACAAAATGT TGAATATTCC GCCGACACCT AAAGACACTC TGTTTAGAGC GAGGGAAGAA GCACAAAAAT ATCTGGATTA TGTTTATCTT GGCAATGTGT GGTAG
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Protein sequence | MRSGNMEAAK PAMFYDKGED LKVHCRLCPH NCTISPGNLG VCRARKNIDG DLYSLNYGKI SSIALDPIEK KPLYRFKSGS KILSIGTFGC NLKCSFCQNW EIAHDNPRLY EVTSETVVSK AKELVSEGNI GIAYTYNEPT IWYEFVYDTA VLAKEEGLSN VLVTNGFIGR EALLMLLPYI DAMNIDVKAY TASFYKNICG GVLENVKETV ELAAEKCHVE VTTLVIPTLN DELKEISEIA KWLSSISRKI PLHLSRYFPN YKMLNIPPTP KDTLFRAREE AQKYLDYVYL GNVW
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