| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1162 |
|---|
| Symbol | |
|---|
| ID | 4810830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 1384096 |
|---|
| End bp | 1385919 |
|---|
| Gene Length | 1824 bp |
|---|
| Protein Length | 607 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640106584 |
|---|
| Product | glucosamine--fructose-6-phosphate aminotransferase |
|---|
| Protein accession | YP_001037587 |
|---|
| Protein GI | 125973677 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
|---|
| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.444963 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTGTGGAA TAGTTGGTTA TATAGGTAGC AGAGATGCAG CACCTATACT TCTGAACGGG
CTTAAAAAGC TTGAGTACAG GGGCTATGAC TCTGCCGGAG TGGCAATTTT AGACAATGGA
AATATAAAAG TGGTAAAGTG CAAAGGAAGA CTTGAAAAAT TGGAGGAAAA GGTGAACTGC
GACGCACCGG TAGGAAATAT CGGAATAGGT CATACCCGTT GGGCAACTCA CGGAGAGCCG
AATGATCTGA ATTCCCATCC TCATATAAGC AGTTCAGGCA AAATTGCCGT TGTACATAAC
GGCATAATTG AAAATTATCT CGAATTGAAA GAGTTCCTTG CGGCGGAGGG TTATGAATTT
GTATCGGACA CTGATACAGA GGTTGTGGCG CATCTTATAG ATTACCACTA TCATGGTGAT
ATAGTTCAGG CTGTTATCAC CTCTATAAAT GAAATTGAGG GGTCTTATGC ATTGGGGGTC
CTTTGCAGAG ATTATCCTGA CAAATTTGTT GCCGCCCGAA AAGACAGTCC GCTTATCGTC
GGCCTTGGAA ACGGTGAGAA TTTTATTGCT TCTGATATTC CTGCAATACT TGAATACACA
AGGGATGTAT ATATTTTGGA AGATAAAGAA ATTGTACTTT TGAGTGACAA GGAAGTCAAG
GTGTTTAACA ACCATGGTTT GGCGGTACAG AAGAAAGTGT TCAAGGTAAA TTGGGATGTT
GCTTCGGCGG AAAAGGCAGG CTACGAACAT TTCATGATGA AAGAAATGTG TGAGGAGCCT
AAAGTGGTAA GAGACACTGT AAATCCGAGA ATAAAAGACG GCAATATAGT ACTGGACAAC
ATCAGGATTA CTGCTGAAGA TTTGAAAAAT ATAAGGAAAA TTTTCATTGT TGCATGCGGC
ACCGCATATC ATGCTGGGGT TGTCGGAAAA TATATAATTG AAAAGCTGGC AAGAATTCCG
GTAGAGGTGG ATGTTGCATC GGAATTCAGA TACAGAGATC CTCTTATAAG CGACAAGGAT
TTGGTAATTA TAATAAGTCA GTCGGGCGAG ACCATTGACA CATTGTTTGC ATTAAGGGAA
TCAAAGAAAA AAGGGGCAAG GGTTCTGTCC ATTGTAAATG TTGTGGGAAG TTCGATTGCA
AGAGAGTCGG ATGATGTTCT TTATACCTGG GCAGGTCCGG AAATTGCCGT GGCGTCCACA
AAGGCATACA ACACCCAGCT CTCGGCATTG TACCTTATAG CCCTGGATTT TGCATATAAA
CTGGGCAGAA TAGACAGGGA TTATTACAGT AAAGTGATAG AAGAATTAAA GGCTGTTCCC
CGGGAAATAG AAAAAGTTTT GGCCAACAGG GATATAATAC AGAAATTTGC ATCACAGCAC
TATAATGCAA AGAGTATTTT CTTTATCGGA AGAGGCCTTG ATTATGCCCT GTCCATGGAG
GGTTCGCTGA AGCTTAAGGA AATTTCCTAT ATTCACTCTG AGGCCTATGC CGGGGGAGAG
TTGAAACACG GTACCATTGC TCTTATTGAG GAGGGTACGC TGGTAGTTTG TCCTGTGACT
CAGGACAGCC TCGTGGAAAA GATGATAAGC AATATCAGGG AAGTAAAGGC CAGAGGGGCG
GTTGTCCTTG CGATAGCAAA GGAGAGCAAC AAGCAAGTGT GCAAGGTTGC CGACGTGGTT
GTTACCATAC CGGATGTTGA TTCGTTTATT GCTCCGATAG TGGCGGTGAC ACCTCTGCAA
TTGTTTGCCT ATTACATGGC TTTGCAGAAG GGTTGTGACG TTGATAAGCC CAGAAATCTT
GCCAAGAGTG TGACTGTGGA GTAG
|
|---|
| Protein sequence | MCGIVGYIGS RDAAPILLNG LKKLEYRGYD SAGVAILDNG NIKVVKCKGR LEKLEEKVNC
DAPVGNIGIG HTRWATHGEP NDLNSHPHIS SSGKIAVVHN GIIENYLELK EFLAAEGYEF
VSDTDTEVVA HLIDYHYHGD IVQAVITSIN EIEGSYALGV LCRDYPDKFV AARKDSPLIV
GLGNGENFIA SDIPAILEYT RDVYILEDKE IVLLSDKEVK VFNNHGLAVQ KKVFKVNWDV
ASAEKAGYEH FMMKEMCEEP KVVRDTVNPR IKDGNIVLDN IRITAEDLKN IRKIFIVACG
TAYHAGVVGK YIIEKLARIP VEVDVASEFR YRDPLISDKD LVIIISQSGE TIDTLFALRE
SKKKGARVLS IVNVVGSSIA RESDDVLYTW AGPEIAVAST KAYNTQLSAL YLIALDFAYK
LGRIDRDYYS KVIEELKAVP REIEKVLANR DIIQKFASQH YNAKSIFFIG RGLDYALSME
GSLKLKEISY IHSEAYAGGE LKHGTIALIE EGTLVVCPVT QDSLVEKMIS NIREVKARGA
VVLAIAKESN KQVCKVADVV VTIPDVDSFI APIVAVTPLQ LFAYYMALQK GCDVDKPRNL
AKSVTVE
|
|---|
| |