Gene Cthe_1139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1139 
Symbol 
ID4810807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1352750 
End bp1353910 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content37% 
IMG OID640106561 
Producthypothetical protein 
Protein accessionYP_001037564 
Protein GI125973654 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGGAT TTAAAGAAAA TAGTACTCCA ATATCCCAAA GCATAGTGGC TAATATTCAA 
TTAGGCCTTC CAGCCACAGT TTCCAGGTTA TCATCCAAAA TGCGGTTTAT TGATAAAATA
GCCCCTGCCC TAAAGGAAAG TGGGGTGGTT AGAAATATAG AATTAATAGC CCCTCTCACT
ATTAAGGCCT CAGGTATTGC GGCAACCAAT AGGACTTCCA GTGCATTTGG CGGAATGTTA
TATGTTGCTG GGGCAGTAAG GCAGGACATA CTCATAAGTG AAGGTTCTAT TTATAAAACA
AGACAGGAAA GTATCGTTGA TGTAGATGAG ATAGATGATT TGGATAATCA GAAAAAGTTG
AAGTTTATAG ATATTATCAA TGTCTATAAA CTCCTGTCTG ACTTAATGGA AGATGATGAA
AAACCCGAAC TAGTTTTGAT GGATGTACCT TTAGTACTTG AGCGTTCGGA TGCTCCCCTT
GAAGATAGAA AGGATACTAT AAAAGTTTAT GATAAATGCA GGGAGATTAT AAAGTTTTTC
TGGGATAAAT ATAAGGATAT GGTATACCCG TTTAATGAAA ATGGAATTAA AATCGCATCA
GTAGGAACAA AAAGGTTTGG TGCAATTATA TATGCACTTA CTGAGGATAA TTTAGTCTAT
ATTCCAGATG ATGTGGACAA TAGTATAATT AAAAAGATGG AAGAACTAAT GCCCAAAATT
CAAGATGTAG GTATTAAAAG GCTGCTAACA GGTATTCTTG TAAAAAGAAC AAGGACAGCA
GCATTTCAAT ATGACGGATT AAATAAGGAT AACAGGCTGG AGCCTGAAAC TTTACGAGAT
GTGGGATTAA TAGGCATGCA TATTAAGGCA GGGAATACTA CACCGCCACT TTTGGTAGAA
GTATTAGGCA GCGTAAAAGA TTGGTCATCT GAAATGCTGG ATGAACTGGC TTCTCAAATT
ATATCCCTGA TTGCATTTGA CCAGAAAAAA GCACTGCCAC TGCCATTATG GTATGCCAAA
TATGCTTTGA AGCCAGTCGA GGCAACAAAT AATGGGAAAA ATGTAATTTT AGAATACTAT
AAAACACAAG CCAGAGAGAT GCTCCAAAGT GAGGCATTGG AGAGCATTTG GAAAGAAGAT
TTGGACGTGT TTGAGGATTA A
 
Protein sequence
MDGFKENSTP ISQSIVANIQ LGLPATVSRL SSKMRFIDKI APALKESGVV RNIELIAPLT 
IKASGIAATN RTSSAFGGML YVAGAVRQDI LISEGSIYKT RQESIVDVDE IDDLDNQKKL
KFIDIINVYK LLSDLMEDDE KPELVLMDVP LVLERSDAPL EDRKDTIKVY DKCREIIKFF
WDKYKDMVYP FNENGIKIAS VGTKRFGAII YALTEDNLVY IPDDVDNSII KKMEELMPKI
QDVGIKRLLT GILVKRTRTA AFQYDGLNKD NRLEPETLRD VGLIGMHIKA GNTTPPLLVE
VLGSVKDWSS EMLDELASQI ISLIAFDQKK ALPLPLWYAK YALKPVEATN NGKNVILEYY
KTQAREMLQS EALESIWKED LDVFED