| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1116 |
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| Symbol | |
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| ID | 4811414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1330912 |
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| End bp | 1333077 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640106538 |
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| Product | HMG-I and HMG-Y, DNA-binding |
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| Protein accession | YP_001037541 |
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| Protein GI | 125973631 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGCGG TAAATACATT AATCAAATGG GAACATGATA ATGATAAAGA AAACGTGGAA
AGGATTTTAT GGCTTGATAG GCAGCAAAAC ATTGCATATG TTATAAACAT ATATTCAAAT
GAAAGCCCTT TCTCAAGGTA TATTTCTGAT ATTGATGAGA GCATTAAGCA GGGGAATGCA
AACATATTGG ATAGCGACCC GTTTGTTAAG GTTATTGATG AAGGAGAATT ATCAGAGAAA
TCAAAAGAAA TACGTGATAA AGCATGGGAA GTAATTAAGG AACTGGTTGT GCTTGAACCT
GTTATTTTTT ATAAGAAAGA ACGGAGAAAA CTCGTATTAA AGGCATCGGC TATTTATAAT
TTGCATGCCA AAACTATTTC AAATTACCTA AAAAGATTCT GGAAAAGAGG GAAAACAAAG
AACGCCTTGC TTCCGGACTA CTATTTATGC GGAGGCCCGG GAAAAGAAAG ACGGGCAGGA
AACAAAAAGC GTGGGCGCAG AAGAAAAAAT GCTGAACTGG TGGGTGAGGG AATCAATGTA
GATGAAGAAA TAAAAAGGAT ATTTAATATC GCTATCAATA AATACTATCA CACAAGCGCC
AAAAATTCTC TTAAACTTGC ATATGAACTG ATGAGAAAGG AATTCTTCAG TGATGAATTT
AAGATAGAAA ACGGAATAAG AGTTCCTGTA ATAAAACCTA TGGGTGAGGT TCCTACATAT
GCTCAATTCC GTTACTGGTA TTATAAAAAT ATCAATTTAA AAAAGCAAAT TTCATCCAGA
CAAAGCAGTA AAAAATATGA GCAGCAGTAT AGACCCCTTT TAGGCAATAC AACTTCCGAA
GCAATTGCGC CAGGAAGTAT CTATCAGATT GATGCAACTG TAGGCGACAT TTACCTTGTG
AGCCGGTATA ACAGGAACTG GATAATTGGA AGACCGGTGA TTTACGCAGT TTTAGATGTT
TTCAGCAGAA TGGTTGTTGG TATTTATGTT GGCTTAGAGG GTCCGAGTTG GATAGGGGCC
ATGATGGCTC TTGCAAATGC AGCGTCCGAC AAAGTTGCCT TTTGCAAAGA ATATGGAATA
GATATTGAAG AAAAGGACTG GCCTGTCCAC CACTTGCCAG AGGCTATTTT GGCTGACAGA
GGGGAACTTG AAGGTAAAAA TGTTGAAAAC CTTATTAATG CTCTACATGT AAAGATACAG
AATACTCCGC CATATCGGGC AGACTGGAAA GCAATTGTTG AACAGCATTT CAGAATTACT
AATTTAAGGG TAAAACCGCT TTTGCCTGGT ACTGTTGACC CTGATGTGAG AGAGCGTGGC
GACAGGGATT ACAGGTTGGA TGCCAAATTG GATATATACC AGTTTACACA GATAATCATA
AAATGTGCCT TGTACCATAA TAACCAGTAT CATCTTAAAA ACTATGACAG GGAAGAGATG
ATGGTTGCTG ATGAAGTAGA ATGCATTCCA CGGGAAATAT GGAACTGGGG GATTGCAAAC
TGTGCGGGAA AATTGCGGAG TGTACCAGAG GATATCGTTA AACTAAATCT TATGCCCTCA
GAGACAGCAA CTGTAACGGC AAAGGGAATT AAATTCAAAG GCTTGTATTA TGCTTCACCA
AAAACTCTTA AGGAGAGATG GTTTGAAAAG GCGAGAAATA AAGGAACATG GAAGATTGAT
GTTTCCTATG ACCCCCGCAA TATGAACTTT ATTTATATCA AGGAGCAAAA TGGCATGGAC
TTCGAGAAAT GTTTTCTCCT GGAACACCAG GATAGGTATA AAGATAAAAA TCTTGAGGAA
ATTCAATACC TTCTTGAAGA GGAGAAACTT CAAATAAAAA TTGCAGAAGA TAAGGAACTG
CAGGCAAAGG TTGATTTAAT TACTGAAATC GAAAGTATTG CAAAAGAGGC AGAAAAATCT
TTTAAAGAAG AAAAATCAAA TGAAAGCGAT TCGAAACGTA AAAAAGGGAT TAGAAACAAC
AGAAAATTAG AAAAGATGTT AAACAGGGAG AAAGAAGCCT TTGAACTGGA TAAAAAAGAA
ACAGGAAGTA ATGCAGAAGT TATACCGTTT AGCAGGGCAG AACAGGAGGA AGAGGTGGAC
GAGAATGATA CGATAAGCCT TTTGATAAGA AAACAAAAGG AGGCTTTGAA GAAAATCCAT
GAATAA
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| Protein sequence | MIAVNTLIKW EHDNDKENVE RILWLDRQQN IAYVINIYSN ESPFSRYISD IDESIKQGNA
NILDSDPFVK VIDEGELSEK SKEIRDKAWE VIKELVVLEP VIFYKKERRK LVLKASAIYN
LHAKTISNYL KRFWKRGKTK NALLPDYYLC GGPGKERRAG NKKRGRRRKN AELVGEGINV
DEEIKRIFNI AINKYYHTSA KNSLKLAYEL MRKEFFSDEF KIENGIRVPV IKPMGEVPTY
AQFRYWYYKN INLKKQISSR QSSKKYEQQY RPLLGNTTSE AIAPGSIYQI DATVGDIYLV
SRYNRNWIIG RPVIYAVLDV FSRMVVGIYV GLEGPSWIGA MMALANAASD KVAFCKEYGI
DIEEKDWPVH HLPEAILADR GELEGKNVEN LINALHVKIQ NTPPYRADWK AIVEQHFRIT
NLRVKPLLPG TVDPDVRERG DRDYRLDAKL DIYQFTQIII KCALYHNNQY HLKNYDREEM
MVADEVECIP REIWNWGIAN CAGKLRSVPE DIVKLNLMPS ETATVTAKGI KFKGLYYASP
KTLKERWFEK ARNKGTWKID VSYDPRNMNF IYIKEQNGMD FEKCFLLEHQ DRYKDKNLEE
IQYLLEEEKL QIKIAEDKEL QAKVDLITEI ESIAKEAEKS FKEEKSNESD SKRKKGIRNN
RKLEKMLNRE KEAFELDKKE TGSNAEVIPF SRAEQEEEVD ENDTISLLIR KQKEALKKIH
E
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