| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1106 |
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| Symbol | |
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| ID | 4811404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1315691 |
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| End bp | 1316746 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640106528 |
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| Product | twitching motility protein |
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| Protein accession | YP_001037531 |
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| Protein GI | 125973621 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.321082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATAA ATGATTTACT GAGGAAGACA GTCGAAAATG ATGCGTCCGA CTTGCATATT
TGTGCGGGGG TGCCTCCGAT TATAAGGGTC TACGGCGATC TTATAAATTT AAACGAGCCG
GTGTTAACTC CGCATGATTG TGTGCAGCTT GCCAAGCAAT GTTTAAGCAG CAGAATGTAT
GAACGCTTTC TTGAAGTCGG AGAAGTCGAT GCATCGTACT CGGTTCCGGG AGTGGCACGA
TTCAGGGTAA ATGTTTTCAA GCAAAGAGGT ACTTGTGCAA TTGCATTCAG AGCAATACCT
ACAGAAGTTC CGTCAATTGA GCAGCTGGGG CTTCCCGGCT TGGTATATGA CCTTGCCATG
AAGCAGAGAG GTCTTGTTTT GATAACGGGA CCTACAGGTC ATGGAAAGTC CACTACACTG
GCTGCCATGA TTAATTACAT AAACAGCAAG AGAAGATGTC ACATAGTTAC GATTGAAGAC
CCTATAGAGT ATTTGCACAG ACATAACAAA AGTATTATAA ATCAGAGGGA AATAGGTTCT
GATACGAAAT CCTACGCAAA TGCGTTGAGA GCTGTATTAA GAGAAGACCC TGACGTTATA
CTTATCGGAG AGATGCGTGA CCAGGAGACC ATTGCAACGG CGCTTACGGC TGCTGAAACA
GGTCACTTGG TTTTGTCTAC TTTGCATACC GTCGGAGCAG CAAAGACCAT CGACAGAATT
ATCGACGTTT TCCCGCCTCA CCAGCAGTCA CAGGTAAGGG TTCAGCTTTC CACCGTGCTT
ATGGGTATCA TATCCCAGCA GCTTATAAAA AGAGCAAATG GCAAGGGACG TGTGCTGGCT
ACTGAGACCA TGGTTTGGAC GCCCGCTATT TCAAATCTTA TTCGTGAAAG CCGTACACCT
CAGATAAATA CTTGTATTCA GACGGGTTCT CAGTTTGGAA TGTATACCAT GGACAGTTGC
CTTGCAGAAC TCTATAAAGC CGGTGAAATT GACTATGAAA GTGCATGCCA GTATTCTGTT
GATATGGATA ATTTGAGAAA ATTAATCTCA AATTAA
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| Protein sequence | MDINDLLRKT VENDASDLHI CAGVPPIIRV YGDLINLNEP VLTPHDCVQL AKQCLSSRMY
ERFLEVGEVD ASYSVPGVAR FRVNVFKQRG TCAIAFRAIP TEVPSIEQLG LPGLVYDLAM
KQRGLVLITG PTGHGKSTTL AAMINYINSK RRCHIVTIED PIEYLHRHNK SIINQREIGS
DTKSYANALR AVLREDPDVI LIGEMRDQET IATALTAAET GHLVLSTLHT VGAAKTIDRI
IDVFPPHQQS QVRVQLSTVL MGIISQQLIK RANGKGRVLA TETMVWTPAI SNLIRESRTP
QINTCIQTGS QFGMYTMDSC LAELYKAGEI DYESACQYSV DMDNLRKLIS N
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