Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1102 |
Symbol | |
ID | 4811400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1312078 |
End bp | 1312629 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640106524 |
Product | fimbrial assembly protein |
Protein accession | YP_001037527 |
Protein GI | 125973617 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3166] Tfp pilus assembly protein PilN |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGGTG ATATTAATTT ACTGCCGGAA GAGATAATGT CCACGACGTC CTATGAGCGA CCAAGTTCAG GCTCCGGTGT GATAAAGTTG GTAATAGGCT TAATTTTAGT GGGTGTCGTT ATCGGATGTT CAATTCTGGC ACCGGTTTTA CACATAAAGA TGCTGGAAAG AGAACTTGCC CAGCTTGAAA AAGAGATAAC CAGCGAAAAA TATGCTGAGG TAAAAAAGGT AAATGCAGAT TTGGCATCTA TCGACGGTGT GTTGGCAAAG AAAAAAACTG TTTTGAATCA AATTGACAGT ACCAGTTATC CGATAAATGA TATATTCGTT GCATTAAAAA ATGCCGAACC TGTGGGATGT ACATTAACTA ATATTGAATT CAAGAATAAT AAACTGAAAT TAACCGGTAT AGCGAAAGAT AATTTTGTAA TTGCCGAGTT TGTGTCTGCT ATTCAGAGAC TCAGTTTTTT AACTTTGGAC AGTGAAGTTA ATGTCCAGAA TGGAAATATA TTCAGCTTTA CATTGCGTGT AGGCGGAAAG GATGGAAACT AA
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Protein sequence | MKGDINLLPE EIMSTTSYER PSSGSGVIKL VIGLILVGVV IGCSILAPVL HIKMLERELA QLEKEITSEK YAEVKKVNAD LASIDGVLAK KKTVLNQIDS TSYPINDIFV ALKNAEPVGC TLTNIEFKNN KLKLTGIAKD NFVIAEFVSA IQRLSFLTLD SEVNVQNGNI FSFTLRVGGK DGN
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