Gene Cthe_1102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1102 
Symbol 
ID4811400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1312078 
End bp1312629 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content37% 
IMG OID640106524 
Productfimbrial assembly protein 
Protein accessionYP_001037527 
Protein GI125973617 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3166] Tfp pilus assembly protein PilN 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGGTG ATATTAATTT ACTGCCGGAA GAGATAATGT CCACGACGTC CTATGAGCGA 
CCAAGTTCAG GCTCCGGTGT GATAAAGTTG GTAATAGGCT TAATTTTAGT GGGTGTCGTT
ATCGGATGTT CAATTCTGGC ACCGGTTTTA CACATAAAGA TGCTGGAAAG AGAACTTGCC
CAGCTTGAAA AAGAGATAAC CAGCGAAAAA TATGCTGAGG TAAAAAAGGT AAATGCAGAT
TTGGCATCTA TCGACGGTGT GTTGGCAAAG AAAAAAACTG TTTTGAATCA AATTGACAGT
ACCAGTTATC CGATAAATGA TATATTCGTT GCATTAAAAA ATGCCGAACC TGTGGGATGT
ACATTAACTA ATATTGAATT CAAGAATAAT AAACTGAAAT TAACCGGTAT AGCGAAAGAT
AATTTTGTAA TTGCCGAGTT TGTGTCTGCT ATTCAGAGAC TCAGTTTTTT AACTTTGGAC
AGTGAAGTTA ATGTCCAGAA TGGAAATATA TTCAGCTTTA CATTGCGTGT AGGCGGAAAG
GATGGAAACT AA
 
Protein sequence
MKGDINLLPE EIMSTTSYER PSSGSGVIKL VIGLILVGVV IGCSILAPVL HIKMLERELA 
QLEKEITSEK YAEVKKVNAD LASIDGVLAK KKTVLNQIDS TSYPINDIFV ALKNAEPVGC
TLTNIEFKNN KLKLTGIAKD NFVIAEFVSA IQRLSFLTLD SEVNVQNGNI FSFTLRVGGK
DGN