Gene Cthe_1094 details

Gene Information

• Locus tag: Cthe_1094
• ID: 4811392
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: -
• Start bp: 1300520
• End bp: 1302439
• Gene Length: 1920 bp
• Protein Length: 639 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640106516
• Product: hypothetical protein
• Protein accession: YP_001037519
• Protein GI: 125973609
• COG category: [C] Energy production and conversion
• COG ID: [COG1032] Fe-S oxidoreductase

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0145194
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTTTTT TACCTATAAC AAGGGAAGAT ATGAAAAACA GAGGATGGGA TGAACTGGAT 
TTTCTTTATA TCAGCGGAGA TGCGTATGTG GATCATCCCA GCTTTGGGCA TGCCATAATA 
ACGAGACTTT TGGAAAGTGA AGGCTACAGG GTGGGGATTG TCGCCCAGCC GGACTGGAGA 
AAGGACGATG ACTTTCTGGC ATTGGGAAAG CCACGTTTGG CCGTGCTTAT ATCATCGGGA 
GTAATAGACT CCATGGTAAA CCATTATACT GCGAGTAAAA AGCCAAGAAG CGATGATTTG 
TACAGTCCGG GAGGAAAAAG CCACAGACGG CCGGACAGGG CGGTGATTGT ATATACCAAC 
AAAGCGCGGC AGCTTTTCAG GGATGTGCCG GTGATTATCG GCGGGATTGA GGCAAGCCTG 
AGGAGATTTG CCCATTATGA TTATTGGGAT GACAGGGTCA GACGTTCCAT TCTAGTTGAC 
TCGAAAGCTG ACCTTTTAAT TTACGGAATG GGAGAAAAAC CGATACTTGA GATTGCCCGG 
TATCTTTCCA TGGGAGTGCC GATAAAGAAG ATCCAGAATG TAAGGGGAAC CGCTTTTCTG 
GCAAGAAAAG AGGACTTGCA TGGAGAGTTG AGAAAATTTA TTGATAATTC GGAAGACAAG 
CCGGAAAAAG GTTATATTCT GCTTCCGTCA TTTGAAGAGG TGTCCACGAG CAAAAGAAAA 
TATGCCGAGG CTTTTATGAT TCAGTACAAT GAGCAGGACC CTTACACCGG AAGCGTTCTT 
GTGCAGCCTC ACGGTGACAG GTTTGTGGCT CAGAATCCGC CGGCTTATCC CCTTTCCGAA 
AAGGAGATGG ACAGGATATA TTCTCTTCCG TATGAAAGGA CTTATCATCC TGTCTATGAC 
AAAGACGGCG GAGTTCCTGC CATAGAGGAG GTACAGTTCA GCATAACAAG CCACAGAGGC 
TGTTATGGCG GTTGTTCCTT TTGCGCGTTG AATTTCCACC AGGGCAGGAT AATTCAAAAA 
CGCAGCCAGG CTTCAATAAT AAATGAGGCA AGAAAGCTTA CATGGCTTCC GGGCTTTAAA 
GGCTATATTC ACGATGTGGG AGGACCCACG GCCAACTTTA GGAACAAGGC CTGCAAAAAG 
CAGGAAATTT CCGGTGCGTG CAAGGAAAGG CAATGCCTTT ACCCCAAGCC TTGCAAAAAC 
CTTATAGTTG ACCACAGCGA ATACCTGGAG CTTTTAAGAA AGCTTCGGGA AATACCGGAA 
ATAAAAAAGG TTTTTATTCG TTCGGGTATA AGATATGATT ATCTGATGCT GGATAAAAAC 
GACGATTTCT TTGTCGAACT TTGCCGGCAT CATGTCAGCG GGCAGCTTAA AGTTGCGCCG 
GAGCATGTGG TGGACCGGGT GCTTGAGAAG ATGGGAAAGC CCCAAAGGGA GGTGTATGAC 
AGATTCGTCA AAAAGTTTTA TGAGATAAAC AGAAAAATAG GCAAGGAACA GTACCTTGTT 
CCCTATTTGA TTTCAAGTCA TCCGGGAAGC GACCTTAATG CGGCGATAGA GCTTGCCGAG 
TACCTGAGGG ATATAAATTA CACGCCTCAG CAGGTACAGG ATTTTTATCC CACGCCCGGG 
ACATTGTCCA CCTGCATGTT TTATACCGGG CTGGACCCAA GGACGATGAA AAAGGTGTAT 
GTTCCAAGGT CGCCGAAGGA AAAGGCAATG CAAAGGGCTC TCTTGCAATT TAGAAGGAAG 
GAAAACTACA AGCTGGTGTA TGAGGCTTTA AAACTTGCCC ACAGAGAGGA TTTAATCGGT 
TACGGCAGGA AATGCCTCAT AAAGCCTCCG GCTAATCTTT CAAAAAACAA TTTGAAAAAA 
GACAGCTCAA AAAGAAAATT AAAAAAAGCC GGAAAAAGCA GAAGAAAGAG CTCAAGATAA 

 

Protein sequence

MAFLPITRED MKNRGWDELD FLYISGDAYV DHPSFGHAII TRLLESEGYR VGIVAQPDWR 
KDDDFLALGK PRLAVLISSG VIDSMVNHYT ASKKPRSDDL YSPGGKSHRR PDRAVIVYTN 
KARQLFRDVP VIIGGIEASL RRFAHYDYWD DRVRRSILVD SKADLLIYGM GEKPILEIAR 
YLSMGVPIKK IQNVRGTAFL ARKEDLHGEL RKFIDNSEDK PEKGYILLPS FEEVSTSKRK 
YAEAFMIQYN EQDPYTGSVL VQPHGDRFVA QNPPAYPLSE KEMDRIYSLP YERTYHPVYD 
KDGGVPAIEE VQFSITSHRG CYGGCSFCAL NFHQGRIIQK RSQASIINEA RKLTWLPGFK 
GYIHDVGGPT ANFRNKACKK QEISGACKER QCLYPKPCKN LIVDHSEYLE LLRKLREIPE 
IKKVFIRSGI RYDYLMLDKN DDFFVELCRH HVSGQLKVAP EHVVDRVLEK MGKPQREVYD 
RFVKKFYEIN RKIGKEQYLV PYLISSHPGS DLNAAIELAE YLRDINYTPQ QVQDFYPTPG 
TLSTCMFYTG LDPRTMKKVY VPRSPKEKAM QRALLQFRRK ENYKLVYEAL KLAHREDLIG 
YGRKCLIKPP ANLSKNNLKK DSSKRKLKKA GKSRRKSSR