Gene Cthe_1092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1092 
Symbol 
ID4811390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp1298782 
End bp1299459 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content42% 
IMG OID640106514 
Producthypothetical protein 
Protein accessionYP_001037517 
Protein GI125973607 
COG category[L] Replication, recombination and repair 
COG ID[COG0419] ATPase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.000000751999 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGCCAG GTACCCTTGC GAGATACCGC AGTAATATTG AAAACTTCAA ACAACGATAT 
GAAAAGGCAA AAATGTATTA CTACAATCAA AAGGGTAAGA TGGACCAGCT TACGGAGCAG 
AAAACTTCAT TGGGGACGCA GCTTAGAAAA GCACTTTATA ACATAGATGT TCTGGAGAAA 
GTGAGACTTC TTCTTCAAAA GGTGTCAGAA TACGCAAGAG AACAGTCAAG GGTACAGATT 
GAATCATTGG TAACTCATTG CCTTCAGTAC ATATTTGACT CCAATATCGA GTTTAAAATT 
GAAATAAATG AGGTAAGAGG AAGACCTGAG GCGGAGTTTT ATGTTGTGAG CAACTTCGGT 
GGGACGCAGA TAAAGACAAA ACCGCAGGAA GCAAGAGGCG GAGGGGTGAT TGATATAATT 
TCCCTCGCCA TAAGGATTGC CATGCTGGAA TGCAGCAACC TGGAAATTAA AGGTCCGATT 
ATTTTGGACG AACCTGCCAA ACATGTGAGC GATGATTATA TTACCCATGT GGCAGAGTTC 
TTAAAACAGG TAACACATAT GTTCCAAAGG CAGGTAATAA TGGTAACGCA CAACAGGCAT 
CTCAGTGAAA TGGCAGATCG ATGGTATCGG GTGGAAATGA AGGACGGAAT AAGTGTTGTT 
ACCGGAGAAG AAAGCTAA
 
Protein sequence
MEPGTLARYR SNIENFKQRY EKAKMYYYNQ KGKMDQLTEQ KTSLGTQLRK ALYNIDVLEK 
VRLLLQKVSE YAREQSRVQI ESLVTHCLQY IFDSNIEFKI EINEVRGRPE AEFYVVSNFG 
GTQIKTKPQE ARGGGVIDII SLAIRIAMLE CSNLEIKGPI ILDEPAKHVS DDYITHVAEF 
LKQVTHMFQR QVIMVTHNRH LSEMADRWYR VEMKDGISVV TGEES