Gene Cthe_1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1088 
Symbol 
ID4811386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp1294739 
End bp1295479 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content44% 
IMG OID640106510 
Producthypothetical protein 
Protein accessionYP_001037513 
Protein GI125973603 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.000152568 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGCAC ATGGACCTAA AATTGAGGCC GGTCAGATTT TGAATCCTGA ATGCTTTCCG 
CCACCAACTG AGTTGGTATG CGTACAGGTG CCAAAGGTAT TTGACCAGGT TGCCCTGAGA 
GACTGCGTAA CAAGAACGGT ATGCTTGAAA AAAGGCGGAG ACCACTGCCA TTCTGTCTTT 
GCCTTTGAAG GCGCAACTGA CTTTGACATT GTTGAAGTAA AGGTAATATC AAAAACGGAT 
TCTTTAACAA AACCCGGTTA CAAGAAACTG AAACTGTTTG TAAAGATAAG GTATAAAATA 
CACTATTCTG ACGGTTCTGA ACAACTTTCC CAGACCGATG AGGCAACGTT TAACCTTACG 
GTAAATGAAA TCTACTGCCC GTCCTGCATT GCACAGGTCG GAGTAATCAA GTCCAATGAT 
GACTTCTGGG AGGGTCCGAC CAAGACCAAG GATCCGGACG GAACCATGAT AAAGGTTGAA 
GCTTTGGCCG AAGCCTTTAA TGACGTGATT AATCCCAATA CAGGAGTACT TTCTCTGGAT 
ATCGGTGTAT TCTTTATTGT TAAATGTGAG TGCGTTGTAC AGCTTCTTAT TCCTTCTTAC 
GGATATTGCC CGGTTCCGCC GGAACAGGTC AATCCGGCCG TACAGAACTG CAAGACTTTT 
AATGACAGAA CAAAGACGCC TTTCCCGACG AAGTTCTTCC CGGATCAGAA ATGGAATCCG 
TTGGATCAAA GAAGTGAATA A
 
Protein sequence
MHAHGPKIEA GQILNPECFP PPTELVCVQV PKVFDQVALR DCVTRTVCLK KGGDHCHSVF 
AFEGATDFDI VEVKVISKTD SLTKPGYKKL KLFVKIRYKI HYSDGSEQLS QTDEATFNLT 
VNEIYCPSCI AQVGVIKSND DFWEGPTKTK DPDGTMIKVE ALAEAFNDVI NPNTGVLSLD 
IGVFFIVKCE CVVQLLIPSY GYCPVPPEQV NPAVQNCKTF NDRTKTPFPT KFFPDQKWNP 
LDQRSE