| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1079 |
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| Symbol | |
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| ID | 4811377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1285501 |
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| End bp | 1287963 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640106501 |
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| Product | nucleotidyl transferase |
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| Protein accession | YP_001037504 |
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| Protein GI | 125973594 |
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| COG category | [G] Carbohydrate transport and metabolism
[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1109] Phosphomannomutase
[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | [TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCTG TCATCATGGC GGGAGGAGAA GGTACCAGAC TTAGACCGCT TACGTGTAAC
AGGCCAAAAC CAATGGTACC TGTTGTCAAC AAACCTGTTA TGGAGCATAT TATTGAACTT
CTGAAAAAAC ATGGATTTAC GGATATTGCA GTTACTTTGC AATATTTACC GGATATGATA
AAGGACTATT TTGGAGATGG AAGTGATTTT GGTATAAATC TTAGATATTA TGTGGAAGAT
AAACCGATGG GAACGGCGGG AAGTGTAAAA AACGCCGAAG AATTTTTGGA TGATACATTT
CTGGTGATAA GTGGAGATGC CTTGACTGAT ATTGATTTGG GAAAGGCGGT AGAGTACCAC
TACAGCAAAG GGTCGATGGC AACGCTGGTA CTGAAAAAGG TCGACATACC TTTGGAATAC
GGCGTTGTTG TTACCGATGA AAACGGCAGA ATAACAAGGT TTTTGGAAAA GCCAAGCTGG
GGCGAAGTGT TCAGCGATAC TGTAAATACC GGTATCTATA TACTGTCTCC TGAGGTTTTA
AAATATTTTA ACAAAAATGA AATGTTTGAT TTCAGCAAGG ATTTGTTTCC TATGCTGCTT
AAGGAAAATA AACCCATGTA TGGATACATC ACCGATGAAT ACTGGTGCGA CATAGGAGAC
CTCATGGCAT ACAGCAAAGC CCATATGGAT GTTCTGGACG GCAAAGTGAA AATAAACATA
CCGGGAAATA AAATAAAAGA CAGAGTATGG GTGGGAGAAG GAACCGTAAT AGAGGAAAAC
GTTGTTATTG AAGAGCCCTG TGTTATTGGA GCAAATACCC GGATCAAGAA AGATTCTGTT
ATCGGCAGTT ATTCCGTTTT GGGAGACAAT AATATTATTG GTGAGAGGAG TGGTATAAAG
AGGAGCATTC TTTGGAAAAA CAACGTGCTT GAAACCAATA CCCAACTGAG AGGTACCGTA
GTTTGCAGCA AGGTCAATAT CAAAGAAGGG GTTTTTGCTT TTGAAAATTC CGTTATAGGT
GATGATACTC AAATAGGAAA AAATGCGGTG ATAAAGCCCA GCATTAAAAT ATGGCCTAAC
AAGATTGTGG AGGGAGGAAC TGAGGTAAAT TCAAACCTTG TATGGGGTTC AAAATTTGTC
CGTTCCATAT TTGGTTTCAG GGGAGTTGCC GGAGAAATAA ATGTGGATAT TACTCCGGAA
TATGCTTCAA AGCTTGGTGC TGCCTACGGA GCTATTTTTA AGGGCAAGGG TAAAATAGGG
GTAAGCTCTG ACGACTCGGC CGCTGCCAAA ATGCTGAAGA TGTCTTTTAT GTCGGGGCTG
CTTTCCGCAG GACTTAAGGT TTTGGACTTT GGAGTCCTCC ATTTGCCAGT TGCAAGATCC
GCAGTAAGGT TTTACGGAGC TGACGGAGGA ATTCATATAA GCACGTCAAG CACAAATTTC
GGCCGGCTTA CCGTGGACTT TTTGGACAAA AACGGCAGCA ATATAAAAAG AGAAGTGGAG
AGAAAAATTG AGAATGCTTT CCAGAGGGAA GACTTCAGCA GATGTGAGGG AGAGGCCATA
AAAGATGTTG AAGTAATACC TGACTATACC AAATACTACT TGAGAAATAT AATAAACAAC
ACCCGGTCAA AAGACTTCGG TTATCGTATA GCTCTTAATT CTTTGTCCGG TTTCATTCTC
GAAACAGTGG GCAATTTGCT TGAAACTTTT GGCTGTACGG TAGAAAAAAC TTCGCTTGAT
TTGCGTAATG CCAAAACAAT GAGAAATGGC AATAAATCTG CGGAAATGAC CTATTTTACC
GACATGATAA AAATGGGAAA CTACGATTTA GGTGTGTCAA TTGAAGATAC TTCTGAAAAA
ATGATGCTGG TGGACAATAA TGGCCGGATT GTATCGGATG ACATGTTTAC GGCCCTTATT
TCATTGATTG TGTTTAAAAC CGTTCAGGGC GGAACAGTGG TGGTGCCGAT TTCCACAAGC
TCGGTTGTGG ACAAACTGGC AGAGCAAAAC AACGGCAAGG TAATAAGAAC GAAAACGTCT
CCTCAGGATA TTATGAACAA GATGCTTGGC AACGAAACAA AGGAAAATGT GTATGAACAG
TTTACGCTGC ATTTTGATGC CATTGCCGGA CTGGTGAAAA TTCTTGATTT CATGAAATCG
GAAAACTACA GTCTTTCCGA CCTTGTAAAC ATGATACCGG ATTTCTATGT AAGCGAAAAA
GAGGTTGAAT GTTCGTGGAA CGTAAAAGGA AAAGTAATAA GACAGATTAT CCAGGAAAAT
GAGGGACAAA GCATTGAAAC CCTTGAAGGA GTAAAGATAT TCAAAGACGG CGGATGGGTA
TTGGTTTTGC CTGATGCCGA ACAGCCCGTC TGCAGAATTA AAAGCGAAAG TTATTCCGCT
GAATTTGCAG AAGAACTTAC GAATTTCTAC GTCAATAAAG TAAGAGAGAT AAGTCAGAAA
TAA
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| Protein sequence | MKAVIMAGGE GTRLRPLTCN RPKPMVPVVN KPVMEHIIEL LKKHGFTDIA VTLQYLPDMI
KDYFGDGSDF GINLRYYVED KPMGTAGSVK NAEEFLDDTF LVISGDALTD IDLGKAVEYH
YSKGSMATLV LKKVDIPLEY GVVVTDENGR ITRFLEKPSW GEVFSDTVNT GIYILSPEVL
KYFNKNEMFD FSKDLFPMLL KENKPMYGYI TDEYWCDIGD LMAYSKAHMD VLDGKVKINI
PGNKIKDRVW VGEGTVIEEN VVIEEPCVIG ANTRIKKDSV IGSYSVLGDN NIIGERSGIK
RSILWKNNVL ETNTQLRGTV VCSKVNIKEG VFAFENSVIG DDTQIGKNAV IKPSIKIWPN
KIVEGGTEVN SNLVWGSKFV RSIFGFRGVA GEINVDITPE YASKLGAAYG AIFKGKGKIG
VSSDDSAAAK MLKMSFMSGL LSAGLKVLDF GVLHLPVARS AVRFYGADGG IHISTSSTNF
GRLTVDFLDK NGSNIKREVE RKIENAFQRE DFSRCEGEAI KDVEVIPDYT KYYLRNIINN
TRSKDFGYRI ALNSLSGFIL ETVGNLLETF GCTVEKTSLD LRNAKTMRNG NKSAEMTYFT
DMIKMGNYDL GVSIEDTSEK MMLVDNNGRI VSDDMFTALI SLIVFKTVQG GTVVVPISTS
SVVDKLAEQN NGKVIRTKTS PQDIMNKMLG NETKENVYEQ FTLHFDAIAG LVKILDFMKS
ENYSLSDLVN MIPDFYVSEK EVECSWNVKG KVIRQIIQEN EGQSIETLEG VKIFKDGGWV
LVLPDAEQPV CRIKSESYSA EFAEELTNFY VNKVREISQK
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