| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1074 |
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| Symbol | |
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| ID | 4811372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1281519 |
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| End bp | 1282481 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640106496 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001037499 |
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| Protein GI | 125973589 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR02884] delta-lactam-biosynthetic de-N-acetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0121745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAAAAA GAAGAGTAAT CAGAGGAGCG ATTGTTCTAA CAATAATGTT AGCTTTACTT
TTGTCAATAA GATTTTTGGC GACAAGAGAG CAGGAAAATC TCAAGCTGCC GGACATGGGC
GGAGTATTCT CGGTGCGCCT TGAGAATCTG GATTTTACAA CGGAGATCAC CGGAATGTTA
AGTGACGGGG TGATAGACGA GGTGCCTTAT GAAGAATATG AGGATGTTTT TGCGGAAGTG
GAAGCGATTC CTGTCAGCGG GGGCTACAGC AACAAGGTTC TGCGCTGGGG AATATTAAGA
AAAGGTTACG GCGAAACACC GCAGGCAGAT CCCGGGGCAC CGGAGCTTTT GGCAAAATAC
GGGGGCGTCT ATTTGGGTGA TACCTCCAAA AAGGTAATAT ACCTTACTTT TGACGAAGGA
TATGAAAACG GCTACACTTC AAAGATTCTT GACGTTCTTC GGGACAACAA TGTGAAAGCT
GTATTTTTCA TAACAGGGCC TTATTTAAAT GAGCATGAGG ATTTGGTGAG AAGAATGGTA
GAAGAGGGTC ATGTGGTGGG AAATCACACG GTACATCATC CCAGCCTTCC GAGCCTTTCA
GACAAAGAAC TTGAAGAGGA AATCCTGGGG CTTGACAGAG CCTTTCATGA AAAATTCGGT
ATCAACATGA AATTTTTAAG ACCGCCGAAG GGCGAATACA GCGAAAGAAC CCTTGCCATA
ACGCAGAAGT TGGGCTATAC CAATCTGTTT TGGAGTTTTG CCTATGATGA CTGGCACAGG
GATAAAATAA GAGGTCCGCA ATATGCTTAC GATAAGGTTA TGAACAATCT TCACAACGGT
GCGGTGCTGC TTTTGCATGC AGTGTCAAAG GACAATGCGG ATGCCCTTGA TATGATTATC
AAGGGAGCCA GGGAAAGAGG ATTTGAGTTT GGAGACGTAA ATGACCTTAT ACTTGAGAAA
TGA
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| Protein sequence | MIKRRVIRGA IVLTIMLALL LSIRFLATRE QENLKLPDMG GVFSVRLENL DFTTEITGML
SDGVIDEVPY EEYEDVFAEV EAIPVSGGYS NKVLRWGILR KGYGETPQAD PGAPELLAKY
GGVYLGDTSK KVIYLTFDEG YENGYTSKIL DVLRDNNVKA VFFITGPYLN EHEDLVRRMV
EEGHVVGNHT VHHPSLPSLS DKELEEEILG LDRAFHEKFG INMKFLRPPK GEYSERTLAI
TQKLGYTNLF WSFAYDDWHR DKIRGPQYAY DKVMNNLHNG AVLLLHAVSK DNADALDMII
KGARERGFEF GDVNDLILEK
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