Gene Cthe_1065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1065 
Symbol 
ID4811363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp1272242 
End bp1272904 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content38% 
IMG OID640106487 
Producttype IV pilus assembly PilZ 
Protein accessionYP_001037490 
Protein GI125973580 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGGT ATAATCTGGA CGGGGGCACC GGGCTGTTTA ATGCCTTGGG TAACAGGAAT 
CCTGCGAAAG TCGTTAAACT TGGCTCTGGA GTTGATATAA AGCATTTTAA AATGTTCGAG 
TACATAAATG CCGAAGTTCT CGGGAAAACT GACGACAGTA TAAAAGTTGA GGCAAAAGAC 
GTTTTAAAAG AGACACTTTT CTTTCCGGGT GACCACGTTG TCGTAAACTA TTCCAATACT 
CAAGATCTTT TTGTAATGGA CGGAAATATC AACCACGTTT ATGATATTAA TCCCCTGATC 
ATTGATGTGA AGATAAACAA AGTTGAAAAA TTGAAAGATT TGCGCAAGCA TGAGAGATTT 
TATGTAAGTC TTATGGCCAA TATCAGAGTG TGCGGGACTT CCAAGCTTGT TTTTGCAGTT 
GTGAAAAACA TGAGTTCCGG CGGTATAAAA ATTAATTGCA ATGAACAGCT TACAACGGAA 
GATGTTCTTG AAGTGGAGAT TTTGCTGGAC AGAACGAACA AACTTGTCTT TAGCGGAGCT 
GTTGTGAGGA AAAACAAAGT AAACGACTAT TACGAATATG GCATTGAAAT CCGGGGCATA 
TCGGAAAACA ATTTAAAGTG TCTTTATCAC TATTTGAAAT GGCTTGATTC GGATTACAGA 
TAA
 
Protein sequence
MARYNLDGGT GLFNALGNRN PAKVVKLGSG VDIKHFKMFE YINAEVLGKT DDSIKVEAKD 
VLKETLFFPG DHVVVNYSNT QDLFVMDGNI NHVYDINPLI IDVKINKVEK LKDLRKHERF 
YVSLMANIRV CGTSKLVFAV VKNMSSGGIK INCNEQLTTE DVLEVEILLD RTNKLVFSGA 
VVRKNKVNDY YEYGIEIRGI SENNLKCLYH YLKWLDSDYR