| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1055 |
|---|
| Symbol | |
|---|
| ID | 4811353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 1260203 |
|---|
| End bp | 1261411 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640106477 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001037480 |
|---|
| Protein GI | 125973570 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAGAA ATAGAATCTT ATATTCATTT TTATATGTTC TGTCTTTAAT ATTTATATAT
TTTTACGGCG GCAAAATCCC TTACATGCTG TTTTATACCG TCTTGTTGCT GCCTTTTGTT
TCCATAGCCA TAACCTCCAT TGCATTTGTC AGATTCAAAT ATGTTCAGGA TATTGATAAG
CGAAGTGTGG TAAAGGGCGA GGAAATAAAC TACACCTTAA GCATACATAA TGAGGATTTT
TTCCTTTATC CTTACATTAA AATTAACTTT TTTAATAATG ACACAATTTT TTCAAACCAA
TTTGAACCAC AATGCTTTTC TCTCCTTCCT TTTAAGAAGA AAACCTTTAG CTACAAGCTT
TGCTGCAAAT ACAGGGGAGA CTTTTTCGTG GGGGTAAAGA GCATAGAATT TGAAGATTAT
CTGGGTATTG TAAAATTTGT TCACGAGCCC ATTTCAATAA AAGAAATTAC AGTGTATCCC
CGTTTGATCA AGCTGGACAG CCTGAAGCTT AAAACAGACT ATTTGTCGGA ATCCCATGCT
CTGTCAAACA GCAGGTTTGA AAACACTCTG ACCTTTTCCG ACGTAAGGAA ATACACCTAT
GGTGACAGCA TGAAGAAGAT ACACTGGAAA CTTTCTTCAA AGATGAATGA GCTTCTTGTA
AAAAACTTTG AAGGTTCGTC CCATGCAAGC TCCGCAATTT TGCTGGATCT TAAGAAAAGC
AACCGTTCCT TCGAAGAAAA CTCGATAATT GAAGATATGC TTATTGAAGC CTCCATTGCC
GTAATTTATT ATTGCCTTGT CAACTGGATA CCAATAAATT TTATATATTA CAACAGTAAA
GGTTTTAATA CCATCGAGGC GAAAAACGCT TTGGAATTTA AAGAAATCTA TGAAATTTTA
TCCGGCATCA AATTTGAAAA TACCATGGAT ATAAAAGACG TCCTTAATAT TTATGTGAAA
AACAGTGTCT TGAAAAAAAC TTCGATACTC CTTTTTACGT CTAATTTGGA TTATGGACTC
TATGATGAGA TTTACAAAAC AAAACTAATG GGGTACGACA TAAATTTAGT GTACGTTTGC
CCGAAACATG TTGTAAATAC CGCTTCTTTT GAAGTAAACA ATATTTTAAA CGAGCTTTTG
GAAATTGGAG TCATGGTTTA TAAAATACAA ACCGAAGATG ACATCAAAAA TGTGCTGGAG
TATAGATAA
|
|---|
| Protein sequence | MQRNRILYSF LYVLSLIFIY FYGGKIPYML FYTVLLLPFV SIAITSIAFV RFKYVQDIDK
RSVVKGEEIN YTLSIHNEDF FLYPYIKINF FNNDTIFSNQ FEPQCFSLLP FKKKTFSYKL
CCKYRGDFFV GVKSIEFEDY LGIVKFVHEP ISIKEITVYP RLIKLDSLKL KTDYLSESHA
LSNSRFENTL TFSDVRKYTY GDSMKKIHWK LSSKMNELLV KNFEGSSHAS SAILLDLKKS
NRSFEENSII EDMLIEASIA VIYYCLVNWI PINFIYYNSK GFNTIEAKNA LEFKEIYEIL
SGIKFENTMD IKDVLNIYVK NSVLKKTSIL LFTSNLDYGL YDEIYKTKLM GYDINLVYVC
PKHVVNTASF EVNNILNELL EIGVMVYKIQ TEDDIKNVLE YR
|
|---|
| |