| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1040 |
|---|
| Symbol | |
|---|
| ID | 4811334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 1243141 |
|---|
| End bp | 1244169 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640106458 |
|---|
| Product | DNA polymerase III, delta subunit |
|---|
| Protein accession | YP_001037465 |
|---|
| Protein GI | 125973555 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1466] DNA polymerase III, delta subunit |
|---|
| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000902231 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGGG AGAGTAAAAT GAGTATAGAT AAATTGAAAC TGGAAGTAAA AAACAAAAGT
CTGGGAAAAC TCTATCTTTT TTACGGCGAA GAAGAATATC TGAAAAAATT TTACCTGGGC
AAAATAGAAG AAATTATTTT AAGCAGGGAT CAAACCGGGC TGAACAAGAT AGTGATAGAG
GGAAAGGCGG AAGCTTCAAA GATTATTGAA GCATGTGAGA CAATGCCGTT TTTCGCGGAA
AAAAAACTGG TTGTTGTTAA AAAGTCGGAA TTGTTTAACT CAAAAAAGTC AGGCTCCTCA
AATAATAAAA ATGATGAATT AATCACGTAT TTACAAAATA TTCCTGAACA TACCTGCCTT
GTTTTTTATG AGGAAAATAT TGATAACAGA CTTAAAATAA CAAGTGCCGT GAAAAAATAC
GGTATGGTGG TGGAATTTCC TTTTCAAAAG CCGGCCGAAC TTGTTAAATG GGCCATTAAA
GTTTTCAAAT CCTACGGCAA GGCAATTGAT GAAAATACGG CATCATACCT TATAGATACA
TGTGAGGAAG GAATGACTGA AATATTAAAT GAAATAAACA AAGTTGTTCT TTATTTGGGC
GAAAGCCAGA AAGTTACCGT AGATAGTATA AAAAAGGTTT GCACAAAGTC AATAAAAAGC
AGAATATTTG ATTTAATTGA CGCCATAGCC GAAAGAAAAC TTGATTTGGC TTTAAAGCTC
TTAAATGACA TGATTATTTT AAAGGAACCC ATGCCAAAGA TTTTGTTTAT GATAGCAAAA
CAATTAAAAC AGTTGTTGGA ATTAAAGCTT TTGTGCAGCA AGGGCATGGA TGCAAAAGAA
GCATGTTCAA AGATGGGGAT AAATCCTTAT GCCGCGAAAA AAATGGTACG GCAGACCGAC
TGTTTTTCTT TGGAGAAACT GAAGGAAGCA ATACGACAAG CTCTTGAGCT GGATCTTTCG
ATAAAGACGG GGCAGATAAA CGACAGAACG GCCGTGGAAA TATTAATCTG CAGTTTGGCG
GCTGAATAA
|
|---|
| Protein sequence | MSRESKMSID KLKLEVKNKS LGKLYLFYGE EEYLKKFYLG KIEEIILSRD QTGLNKIVIE
GKAEASKIIE ACETMPFFAE KKLVVVKKSE LFNSKKSGSS NNKNDELITY LQNIPEHTCL
VFYEENIDNR LKITSAVKKY GMVVEFPFQK PAELVKWAIK VFKSYGKAID ENTASYLIDT
CEEGMTEILN EINKVVLYLG ESQKVTVDSI KKVCTKSIKS RIFDLIDAIA ERKLDLALKL
LNDMIILKEP MPKILFMIAK QLKQLLELKL LCSKGMDAKE ACSKMGINPY AAKKMVRQTD
CFSLEKLKEA IRQALELDLS IKTGQINDRT AVEILICSLA AE
|
|---|
| |