Gene Cthe_1036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1036 
Symbol 
ID4811330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp1239555 
End bp1240250 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content39% 
IMG OID640106454 
Producthypothetical protein 
Protein accessionYP_001037461 
Protein GI125973551 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0192958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCA TAGGGAAATA CCTTGCTATT CTTATTGCTG TTGTTTTGTT GTGGAATCAG 
GTGATACTTA AGCCGTTTAG GGTTTTATCC ATGTTATTTC ACAAGATGGG GCATGCTGTT 
GTTGCATTTC TTTTCGGTTA TGGTTCAAAT GCTTTCGAGG CTGCATTTGG GTCAATGGGA 
GACTCAATGG TTGGCGCACA AGGGTGGTTT CCTTCTTTTA TGATATCCAG CGGCGGATAT 
TTGGGAAGTA TATTGTTTTT TGCACTGATT ATGTTTTTAA AAAAGACAAA TGCCAAAAAA 
TATCTTCTTG GAAGTTTGGC AATAATATAT CTTTTTATCT CCATAAGCGT TCCTGCATTA 
AGGGGTACTG TTTTGTATGC TGCTGTATTT ACTGCAATTG CGATTCTTCT TTATATGATT 
CAAAGAGGCG GCGTGGAGGA AATTGCAATT GATGTGGTAG CGATGTCTTC CGTCGCATAT 
ATTATTTATG AGACGCTGGT TGATACCGTG TTGTTTAAAA TTAATCAGCA GTTTTCGATT 
ATAAAGGGAT GGAACACGGG TATACCTTTG GATATGGCAA GATTAAAAAA TATTACCGGA 
TTGCCGGAAT TGCTGTGGGC CGTGGTGTGG ATTGTAATTG CGGTATTGGT GATAAACGCG 
GTGGTTTTAA AGATGGGTGG CACAGGAAAA AGGTAG
 
Protein sequence
MKTIGKYLAI LIAVVLLWNQ VILKPFRVLS MLFHKMGHAV VAFLFGYGSN AFEAAFGSMG 
DSMVGAQGWF PSFMISSGGY LGSILFFALI MFLKKTNAKK YLLGSLAIIY LFISISVPAL 
RGTVLYAAVF TAIAILLYMI QRGGVEEIAI DVVAMSSVAY IIYETLVDTV LFKINQQFSI 
IKGWNTGIPL DMARLKNITG LPELLWAVVW IVIAVLVINA VVLKMGGTGK R