Gene Cthe_1032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1032 
SymbolgatA 
ID4811326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1234602 
End bp1236062 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content44% 
IMG OID640106450 
Productaspartyl/glutamyl-tRNA amidotransferase subunit A 
Protein accessionYP_001037457 
Protein GI125973547 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID[TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.929354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAACTTT ACGAACTTAC GGTTCACGAA ATGAGTGACT TCATAAAAAA CAGAAAGGTC 
AGTGCCGTGG AGCTTGTACA ATCGGTACTT GACAGAATAA ATGCGATAGA CGAAAAAATA
GGAAGTTATA TAACGGTTCT TGAAGAAGAG GCTTTAGAGC AGGCCAAAGA GGTGCAGGAA
AGAATAGACA AGGGAGAGGC AAAATCACCT CTTGCAGGTA TACCCATGGC ACTAAAGGAC
AATATTTGCA CCAAAAATGT AAAAACAACC TGCGCGTCAA AAATGCTGGG AAGTTTCATA
CCTCCCTATG ATGCGACGGT GTCGAAAAAA CTTTACAATG AAGGTGCGGT GCTTTTGGGA
AAACTTAATA TGGATGAGTT TGCCATGGGG GCGTCCACTG AAAATTCTTA TTTTAAAATT
ACACGAAATC CATGGGACCT TGAAAGGGTT CCGGGAGGTT CCAGCGGAGG TTCGGCTGCT
GCTGTTGCCG CCGGTATGGC GGGATTTGCA CTGGGTTCCG ATACGGGGGG CTCAATAAGG
CAGCCTGCTT CTTTTTGCGG CATCGTAGGT ATGAAACCCA CCTATGGTGC GGTTTCGCGT
TTTGGTTTGG TGGCTTTTGC ATCTTCCATG GACCAGATTG GTCCGTTGAC CAAGGATGTA
ACGGATTGCG CCATGGTACT GAATGCCATA ACCGGTTACG ACCCGATGGA TTCCACTTCT
GCCGACGTAA AGTATCCTGA TTATTCAAAA GCTTTGATTA ATGACGTGAA AGGAATCAGA
ATCGGCATAC CGAAAGAATA TATCGGTGAC AACACAAATC TTGATGTGAA AAAAGCAGTT
TTGGATGCGG CAAAGACTTT AAAAGAGCTT GGGGCGCAGG TGGCGGAGTG TTCACTCCCT
TTGACCGAAT ATGCCATTCC CGCTTATTAT ATTATATCAT CTGCCGAGGC CAGCTCCAAT
CTTGCAAGAT ACGACGGAAT AAAGTATGGA TACAGAGCAA AAGAATATAC AGATTTGATG
GACTTGTACG TAAGAACAAG GAGCGAAGGT TTCGGTGTCG AGGTAAAGAG AAGGATATTG
CTGGGCACAT ATGCGCTAAG CTCGGGTTAT TATGATCAAT ATTATAAAAA AGCGCTTCAG
GTAAGGACGT TGATTAAAAA CGCCTTTAAT GAGGTGTTTG AGAAATACGA TGTTCTGCTT
GGCCCTGCAG CGCCTACCAC AGCCTTTAAA ATTGGGGAGA AAAAAGAAAA ACCTCTTGAA
ATGTATCTCG GAGATATATA TACGGTGTCG GTGAATATTG CGGGACTTCC GGCACTTACG
ATACCGTGCG GATTTGACGG CAATAACCTT CCCATAGGAC TGCAGCTCAT TGGAAAACCC
TTTGATGAAA GTACGTTGCT GCGTGTAGGT TATACTTTTG AACAAAACAC AGAGTTTCAT
AAAAAAAGGG CAGGAATTTG A
 
Protein sequence
MELYELTVHE MSDFIKNRKV SAVELVQSVL DRINAIDEKI GSYITVLEEE ALEQAKEVQE 
RIDKGEAKSP LAGIPMALKD NICTKNVKTT CASKMLGSFI PPYDATVSKK LYNEGAVLLG
KLNMDEFAMG ASTENSYFKI TRNPWDLERV PGGSSGGSAA AVAAGMAGFA LGSDTGGSIR
QPASFCGIVG MKPTYGAVSR FGLVAFASSM DQIGPLTKDV TDCAMVLNAI TGYDPMDSTS
ADVKYPDYSK ALINDVKGIR IGIPKEYIGD NTNLDVKKAV LDAAKTLKEL GAQVAECSLP
LTEYAIPAYY IISSAEASSN LARYDGIKYG YRAKEYTDLM DLYVRTRSEG FGVEVKRRIL
LGTYALSSGY YDQYYKKALQ VRTLIKNAFN EVFEKYDVLL GPAAPTTAFK IGEKKEKPLE
MYLGDIYTVS VNIAGLPALT IPCGFDGNNL PIGLQLIGKP FDESTLLRVG YTFEQNTEFH
KKRAGI