| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1030 |
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| Symbol | |
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| ID | 4811324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1232271 |
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| End bp | 1233095 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640106448 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001037455 |
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| Protein GI | 125973545 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.023544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAA ATACACCGGT CAAATATGCA ATTTGTATGG TCTTAATCAT TTTGGCTTTT
TTGGTTCACA AAACAGCCGG ATACTTACTT TTTTTGGCTT TTCTCATTTA TATTTTATAC
AGCCAAAGAA GTATTTTTTA TCAAGTTCTT GCGACCCGTG CTTATAAAAA AGGAGATATG
GACAGAGCGA GCGGGTGGCT TGAAAAGGCT TGCAGTGCCG CTAAAGGCAG ACCTTCGGTT
AAAATTTTGT ATGGATATTT GCTTCTTAAG ACAGGAAAGC TGGAAGAGGC GGAAAAGGTT
TTTGAAGAGC TTTTAAACTC AAATATCGAC AATGCCGGCT TGCTTCAGGC AAAGTCCAAC
TATGCATTGG TGCTTTGGAA AAAGGGACAG TTGAAAGATG GCATAAAAAT GCTGGAGGAT
GTGTTTTCAA ACTATAAGAA TACAACCATA TACGGAAGTC TCGGATATCT TCTTATTCTG
GACGGGGATA TGAACAAAGC TTTAAATTTC AATAAGGAGG CGTATGAGTA TAACAGCTCT
GATCCTGTCA TACTTGACAA TTTAGGCTAT ACCTATTACA AAATCGGTAA CATTAAAAAG
GCCGAGGAAA TATATCGAAA GCTTATAGGT CTTAATCCAA ATTTTCCTGA GGCATACTAT
AACTATAGCT GTGTTTTGAA AGATTTGGGA ATGACGGAGA GTGCGCTAGA GATGGCCAAA
AAGGCTAAAA ATTACAGATT GTCATATCTC AGCAATCTTA AAGAAGAGGA GCTGGACAAC
TATTTGGAGG AGCTGCAAAG TTTAATTGCC ACAAAATCTG AATAA
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| Protein sequence | MEKNTPVKYA ICMVLIILAF LVHKTAGYLL FLAFLIYILY SQRSIFYQVL ATRAYKKGDM
DRASGWLEKA CSAAKGRPSV KILYGYLLLK TGKLEEAEKV FEELLNSNID NAGLLQAKSN
YALVLWKKGQ LKDGIKMLED VFSNYKNTTI YGSLGYLLIL DGDMNKALNF NKEAYEYNSS
DPVILDNLGY TYYKIGNIKK AEEIYRKLIG LNPNFPEAYY NYSCVLKDLG MTESALEMAK
KAKNYRLSYL SNLKEEELDN YLEELQSLIA TKSE
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