| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1016 |
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| Symbol | |
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| ID | 4811310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1216468 |
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| End bp | 1217526 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640106434 |
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| Product | cell wall hydrolase/autolysin |
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| Protein accession | YP_001037441 |
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| Protein GI | 125973531 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000634005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAAGC CAGTAATTTT ATTAACTGTA TTAATCCTTG TGATACTCAT GACAGTTCCC
GGCTTTGCCG CAAACGGCCA GTATTATTCG GGATATTGGG GAGTAACTTC CAATGCTTTG
ATAGCTGTGA ACGGAAAGGT TTTAACTCTC GAACGAAACC CGGTAATTAT CGAGGGAAGA
ATTTTAGTAC CGGCGAGAAC TACTTTTCAA GTTTTGGGAG TAACCACCGA ATGGTATTCC
TCTTCCGGAG TTGTAAAGAT GGTGAAAGGA AATAAGGCCG TTAAAATGAC TGTTGGAAGT
AAAGTGGCGC ACTCGGGAGG TTCTGTAAAG TACATGGAAG CTCCGCCTAT TCTCGTGAAC
GGCACAGTTA TGGTTCCAAT GAGATTTGTT GCTGAAACCT TCGGCGAGAA TGTAGGCTGG
GATGCAAAAA ACGAAATGGC TTATATCGGA AACAAACCGG CGGAAATACC TTCAAGAAGC
GGTCTTAAAT CCAATAGAAC ATACAAGGTC GTTATTGATG CCGGTCACGG AGGGAGCCAA
TCGGGCGCTG TGTACGGAGG AGTAAAAGAA AAAGATTTGA ACTTGGATAT TGCCAAGCGG
CTGAATACCT TGCTTAAAGC TGAAGGCATA AAAACATATA TGACCCGGGA AAAAGACATA
ACAGTGGGGC TTTATACTAG ATCTGACCTT GCGAACAAAG AAAAAGCCGA TTTGTTTGTC
AGCATTCATA ACAATGCCGG GAACAGCAAA ACTTCAGGGT CCATGACTTT GTATCATCCT
GACAGCGGCA AAAAAAAGGG AAATCTTACC GCATATGAAT TTGCTCAAAT AGTGCAAAAA
AATTTGAACA AGACCCTGGG GTCAAAGAAT ATGGGAGTTA TTCAAAGACC AAATCTTGCA
GTATTAAGGA CGACAAACAT GCCCGCGGTT ATAGCGGAAA TAGGTTATAT GTCCAACAGT
GCGGAGCTTG CAAAATTAAA AACCGATTCA TACAGGCAGA AAGCTGCCGA AGCGTTGAGA
GATGCCGTTA TTGAAAGTCT TGAAAAAATG TATAAGTAA
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| Protein sequence | MKKPVILLTV LILVILMTVP GFAANGQYYS GYWGVTSNAL IAVNGKVLTL ERNPVIIEGR
ILVPARTTFQ VLGVTTEWYS SSGVVKMVKG NKAVKMTVGS KVAHSGGSVK YMEAPPILVN
GTVMVPMRFV AETFGENVGW DAKNEMAYIG NKPAEIPSRS GLKSNRTYKV VIDAGHGGSQ
SGAVYGGVKE KDLNLDIAKR LNTLLKAEGI KTYMTREKDI TVGLYTRSDL ANKEKADLFV
SIHNNAGNSK TSGSMTLYHP DSGKKKGNLT AYEFAQIVQK NLNKTLGSKN MGVIQRPNLA
VLRTTNMPAV IAEIGYMSNS AELAKLKTDS YRQKAAEALR DAVIESLEKM YK
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