| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0988 |
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| Symbol | |
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| ID | 4811282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1181644 |
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| End bp | 1182537 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640106406 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001037413 |
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| Protein GI | 125973503 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGGAA TATTGAATGT TTTAAAACCA CCGGGTATGA CTTCCTTTGA TGTGGTGGCA
TACCTTAGGG GAATCCTGAA AATAAAAAAA ATCGGACACA CAGGCACGCT TGACCCCGGT
GCGGCAGGAG TGCTTCCTGT TTGTACAGGC AAGGCTACAA AAGCAATTGA ATATCTTTCG
GATAAAGACA AAGTTTACAG AGCGGAGCTT TTGCTGGGTG TATCCACTGA TACCCAGGAT
TCTTATGGAG AAGTTATAAG AGAGCAGGAA GTAAAGGCTT CCGTTGAAGA TATTGAAAAG
GTAATTAAGT CTTTTGAAGG GGACTACAGT CAGCTTCCTC CCATGTATTC GGCAGTCAAG
ATGAACGGGA AGAAGCTGTA TGAGCTTGCC AGAAGCGGCA TTGAAGTGGA ACGGACTCCA
AGAAAGGTTA AAATACATTT TATTAATATT TTAAGTATCC GAGGCAACAG AGTTGTTTTT
GACGTGGGAT GTTCCAAAGG CACTTATATA AGAACTTTAT GTTCCGATGT CGGAGACAAA
TTAGGCTGCG GAGGACATAT GGGTTTTCTG GTAAGGCTGA AATCGGGAAG TTTTGACATT
AAAAATGCTT TGACTCTGGA AGAGATAAAA GAAACAGCCG AGAAAGGAAA CCCTGAAGAG
ATTCTGACAA GTATTGATAA AGTTTTTAGC GATTATGATA AAATTTATCT TAATGAAAAG
GATAAAAAGA GATTTTTGAA CGGGGGATTT GTAACTCTCG GAAAATACGG TAAGTTTGCT
TTGACCCAAA AAGTCAGAGT ATATGATAAG GACGGTGCTT TTCTGGCTTT GGGGGAAGCG
GTTTTGAACA AAAGTGAAGA GTTGAGTCTT AAAATTGACA AGCTTTTTGT ATAA
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| Protein sequence | MNGILNVLKP PGMTSFDVVA YLRGILKIKK IGHTGTLDPG AAGVLPVCTG KATKAIEYLS
DKDKVYRAEL LLGVSTDTQD SYGEVIREQE VKASVEDIEK VIKSFEGDYS QLPPMYSAVK
MNGKKLYELA RSGIEVERTP RKVKIHFINI LSIRGNRVVF DVGCSKGTYI RTLCSDVGDK
LGCGGHMGFL VRLKSGSFDI KNALTLEEIK ETAEKGNPEE ILTSIDKVFS DYDKIYLNEK
DKKRFLNGGF VTLGKYGKFA LTQKVRVYDK DGAFLALGEA VLNKSEELSL KIDKLFV
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