| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0977 |
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| Symbol | |
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| ID | 4811271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1167087 |
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| End bp | 1168460 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640106395 |
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| Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
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| Protein accession | YP_001037402 |
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| Protein GI | 125973492 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000230391 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATTT TAAAATGCGA AGAAGTAGTA AAAGCGGTTG GCGGCACTTT AATATCCGGA
GAAGTCAATA CTGTTTTTTA TAACATTTCC ACCGATTCGA GGAATATAAA ACAGGGAGAT
TTGTTTATTC CTCTTATTGG AGAAAGATTT GACGGACACA ACTATATTGC GTCTGCTTTG
GAGCATGGAG CTCTGGGCAG CCTTACTCAA AAGGAAACGG AACCATTTCC CGGCAAAGTT
TTAATAAAGG TTTCGGATAC ACTTAAGGCT TTAAGGGATC TTGCGGTGTA TTACAGACAA
AAATTCAAGA TCCCTTTTGT AGGAATTACC GGAAGTGTGG GGAAAACAAG CACCAAGGAA
ATGGTTGCGG CAGTGCTGTC AAAAGGCTTC AAGGTGCTGA AGAACCAGGG TAATTTTAAC
AATGAAATCG GTGTGCCTCT TACAATTTTC AACCTTGACA AATCCCACGA GGCTGCCGTT
GTGGAAATGG GCATGAGCGG TTTTGGCGAA ATAAGCCGTC TTACGTCTAT AGTAAAACCT
GATATTGCAA TAATAACCAA TATAGGAGTA TCCCATATAG AAAAGCTGGG TTCAAAAAAT
AACATATTAA AAGCAAAAAT GGAGATTTTT GAGGGCTTAA ATGAGAAAGG ATTGGCAATA
CTAAATGGTG ATGACAAATT ATTGTATGGA TTAAACAACC TTTTGAAGTT CAGGACGGTA
TTTTACGGAA TGGAGGAAGG GCTGGATTTG CGGGCATACA ATGTGGAATC TTTGGGGGAA
AAAGGCTCCA CTTTTGATAT TGAGATTAGA GGAAAAGAAT ACAGGGTGAG AATTCCTGTG
CCGGGAATTC ATAATGTTTA CAATGCCCTT GCAGGTATAG CAGTGGGAAT TGAGCTTGGA
ATACCGCCGG AGAAAATAGT TGAGGGAATT GAAGAGTTTT CCCCGGGAAA GATGAGACTT
GATATTATAA ACTATAACGG TTTAAAGATT ATAAACGATG CTTACAATGC AAGTCCCCAG
TCAATGGAGG CGGCTATTGA CGTTTTAAAG GATATATCCG GTGAAGGCAG AACCTTTGCC
GTATTGGGTG ACATGCTTGA GCTGGGGGAA TTCTCTAAAA GTGCTCATAT GGAAGTGGGA
AAATATGCTG CTTCAAAAGG GATAGATTAT ATTGTGGCCG TGGGAGAGTA CAGAAGTAAT
ATTGTCCGTG GTGCCGTTGA AGCAGGAGCA AAAGAAGAAA AGGTTTTTGA ATTTAAAGAC
AATATGGATG CCGCAAAGTT TTTAAAAGAA TTTGTAAAGA GCGGTGATGT GCTTCTTGTA
AAGGGTTCGA GAGGTATGAA AATGGAGGAA ATAGTTAATA TATTGACTGG CTGA
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| Protein sequence | MEILKCEEVV KAVGGTLISG EVNTVFYNIS TDSRNIKQGD LFIPLIGERF DGHNYIASAL
EHGALGSLTQ KETEPFPGKV LIKVSDTLKA LRDLAVYYRQ KFKIPFVGIT GSVGKTSTKE
MVAAVLSKGF KVLKNQGNFN NEIGVPLTIF NLDKSHEAAV VEMGMSGFGE ISRLTSIVKP
DIAIITNIGV SHIEKLGSKN NILKAKMEIF EGLNEKGLAI LNGDDKLLYG LNNLLKFRTV
FYGMEEGLDL RAYNVESLGE KGSTFDIEIR GKEYRVRIPV PGIHNVYNAL AGIAVGIELG
IPPEKIVEGI EEFSPGKMRL DIINYNGLKI INDAYNASPQ SMEAAIDVLK DISGEGRTFA
VLGDMLELGE FSKSAHMEVG KYAASKGIDY IVAVGEYRSN IVRGAVEAGA KEEKVFEFKD
NMDAAKFLKE FVKSGDVLLV KGSRGMKMEE IVNILTG
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