Gene Cthe_0936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0936 
Symbol 
ID4811229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp1123742 
End bp1124737 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content45% 
IMG OID640106355 
Product3-oxoacyl-[acyl-carrier-protein] synthase III 
Protein accessionYP_001037363 
Protein GI125973453 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACAAGA CTTGTAATTG CGGAATTTTG GGGTTGGGGA GCAGCTTTCC GGAAAAAGTG 
CTTACCAATC ACGATCTGGA AAAAATGGTG GATACGTCGG ATGAATGGAT TATAAAAAGA 
ACAGGAATAT CGGAAAGAAG AGTATTGGAT GAGGATATGC CGACATACAA ACTGGGCGTG 
GAGGCTGCCA AAAAGGCTCT GGCCGATGCC AAAGTAAATC CGGAAGAAGT GGATTTGATA 
ATTGTAACCA CAGAGACACC CGATTATCTT TCCCCTTCCA TGTCCTGTCT TATTCAAAGT 
GAAATCGGAG CAACCAGGGC GGCTGCCTTT GATCTCAATG CTGCATGCTC CGGATTCATT 
TATGGCTTGT CCGTGGCCAA TCAGTTTATT AAGTCAGGCT TTTACAAATA TGTGTTACTT 
GTGGGATGTG AAGGACTTTC GAAAGTAGTT GACTGGAAAG ACAGGAATAC CTGCGTTCTT 
TTCGGGGACG GCTCAGGGGC GGCTCTGCTC GGACCGGTGG AGGAAGGCTA TGGAATAATT 
ACCACCTATA CCGGAGCGGA CGGTGAAATG GGAAAAAACC TTACCATACC TTGCTGCTAT 
ATTGCGTCCC GCGATATTGA GGCAAGAGGA GGAGAAGCCA AAAGAACGCT GTGGATGGAC 
GGCAGCGAAG TTTTCAAATT TGCGGTAAAA ATTATGGAAC ATGCAACTAT AAAAGTGTTG 
GAAGACACAG GACTTTCCAT GGATGATATA AAGGTTATCA TGCCTCACCA GGCCAATATA 
AGAATTTTGG AAGGTGCGGC AAAGAGGCTT AACATACCAA ATGACAAGGT GTTTTCAAAC 
CTTCACAAAT ACGGCAATAT TTCGTCCGCA TCCATACCTG TGGGATTGGA TGAGGCTTAT 
AGACAAAATC TCTTTTCCAA AGGTGACAAT TTAATTTTAG TCGGTTTTGG AGGAGGCCTT 
ACCTGGGGCT CCGCCGTAAT CAGATGGAAT AAATAA
 
Protein sequence
MNKTCNCGIL GLGSSFPEKV LTNHDLEKMV DTSDEWIIKR TGISERRVLD EDMPTYKLGV 
EAAKKALADA KVNPEEVDLI IVTTETPDYL SPSMSCLIQS EIGATRAAAF DLNAACSGFI 
YGLSVANQFI KSGFYKYVLL VGCEGLSKVV DWKDRNTCVL FGDGSGAALL GPVEEGYGII 
TTYTGADGEM GKNLTIPCCY IASRDIEARG GEAKRTLWMD GSEVFKFAVK IMEHATIKVL 
EDTGLSMDDI KVIMPHQANI RILEGAAKRL NIPNDKVFSN LHKYGNISSA SIPVGLDEAY 
RQNLFSKGDN LILVGFGGGL TWGSAVIRWN K