Gene Cthe_0913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0913 
Symbol 
ID4810534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1092828 
End bp1094048 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content41% 
IMG OID640106332 
Producttransposase IS116/IS110/IS902 
Protein accessionYP_001037340 
Protein GI125973430 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCTATG GTGGTATTGA TGTAGCCAAG TATCGTCATG AGATTTGTAT TGTGGATGAA 
AGCGGTAATG TAATCCTCCA AATTTTTGTG GATAATACTA GAAATGGCCT TGATAAACTC
ATTCATAACT TGAAGCGATT AGAAATCGAA GTGAGTAATG TTGAGTTTTG TTTGGAAGCT
ACCGGCCACT ACTGGCTAAG TCTTTACTAC CACCTTACAG AGTTGGGGTA TAAAATCCAT
GTGATAAATC CTATCCAATC CGATGCTTTA CGTAATTTCT ATGTCCGTAA AACTAAAACA
GATCGTAAGG ATGCTCACCT TCTTGCAGAT ATCGTTCGTT TTGGTCATAT TTCTGAAACC
AAACTTGCTT CAGAAACTGT TCTTAAGCTG CAAAACCTAT CACGGCTTCG TTTCGAATTT
GTCCGGCAAG TGGGTGGGCT AAAAAACAGG GTTCTAGGTA TCCTTGATAG GATCTTTCCT
GAATACCCGC AATGTTTTTC TAATGTTTTT ATTAATACAT CCCGGGAATT GCTTAAGTCT
TTTACTGCAC CAGAAGACCT GGCTGAAGCA GATCTATCAG AGCTAACCGA TTTTTTAAAT
AAGCATTCTC GGGGTAGGTT GGGAGTTGAT CGGGCCAAAC AGATACAGGC TCTGGCTAAA
GGCACTTTTG GCATTAATAT TGCACTAGAT GCTTTTACTC TTGAACTTCG ATTATTAGTC
GAACAAATTG AATTTATCGA AGAACAAATC AGTGTTATAG AAGAAGCCAT TGACCAAGTT
ATGGAGGAAA TGCGGCCTAG TAAGGATACT GCTTATCGAC ATGTTTTAGA GACTATCCCT
GGTATTGGGC CTGTTCTTGC TGCTTCAATT ATTGGAGAAA TTGGCGATAT TAACCGCTTT
CCTAATGCTA AGGCTCTTGT GGCTTATGCT GGTTTAGATG CAACTGTGCG CTCTTCCGGT
CAGTTTGAGG GTACCCGTAA TCGTATTTCA AAAAGGGGTT CTCCTGTCCT AAGGCATAGT
ATTTGGCTCG CTGCTGTTTC TGCTAGACGT TTCAATCCGG AAATGAAAGA GTTTTTTGAG
AAAAAACGCA GTGAAGGAAA GCATACCTTG GTTGCAACGG GTGCCGTAGC TCGCCGTATG
GTTCACTTGA TATACTCTCT ATGGAAAGAT AACAGGCCTT TTGACCCTAA CTATCAATGG
TCACCCACAA ACTCTCGTTA G
 
Protein sequence
MFYGGIDVAK YRHEICIVDE SGNVILQIFV DNTRNGLDKL IHNLKRLEIE VSNVEFCLEA 
TGHYWLSLYY HLTELGYKIH VINPIQSDAL RNFYVRKTKT DRKDAHLLAD IVRFGHISET
KLASETVLKL QNLSRLRFEF VRQVGGLKNR VLGILDRIFP EYPQCFSNVF INTSRELLKS
FTAPEDLAEA DLSELTDFLN KHSRGRLGVD RAKQIQALAK GTFGINIALD AFTLELRLLV
EQIEFIEEQI SVIEEAIDQV MEEMRPSKDT AYRHVLETIP GIGPVLAASI IGEIGDINRF
PNAKALVAYA GLDATVRSSG QFEGTRNRIS KRGSPVLRHS IWLAAVSARR FNPEMKEFFE
KKRSEGKHTL VATGAVARRM VHLIYSLWKD NRPFDPNYQW SPTNSR