Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0902 |
Symbol | |
ID | 4810523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1078655 |
End bp | 1079506 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640106321 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_001037329 |
Protein GI | 125973419 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000633792 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGACA AATTTACAAC GGCAAGCTTT TTGGAATCAA AAAAACAAGG TAGAAAAATT ACAATGCTTA CAGCCTATGA CTACCCAACG GCTAAAATTT TGGATGAAGC AGGAGTGGAC TCAATACTGG TCGGGGATTC TCTTGGAATG GTAGTCCTGG GATATGAGGA TACTACGCGG GTGACGATGG ATGACATGGT TCATCACACA AAAGCTGTTG TGCGGGGAGT AAAAAGGGCA ATGGTTGTTG CAGACATGCC GTTTTTATCC TACCATACAG GAAAAAACGA CAGTGTAAGA AATGCCGGAA GACTTGTGTC CGAAGGGGGC TGCAAGGCTG TAAAACTTGA AGGCGGCGAG GATATAATTG AAAACGTGAA GGCCATCATC AGTGCCGGAA TACCCGTAGT CGGACATCTT GGATATACAC CCCAGTCAAT AAATGTTTTC GGAGGACACA AGGCTCAGGG AAAAACTATT GACACAGCAA AGAAAATATA CCGGGATGCA CTTTTGTTGC AAAAAGCAGG GGTTTTTGCC GTGGTTTTGG AGTGTGTGCC GTATAAACTT GCGGCTTTTA TTTCAAAGAG ATTGGATATA CCCACAATAG GAATTGGGTC CGGTCCGGAC TGTGACGGAC AGGTTCTTGT CATACATGAT TTGACAGGTA TGTTTAAGGA TTTTACTCCA AAGCATGTTA AAAAGTACGC TGAGATTGGA GAAACTGTAT CCACGGCGGT AAAAAGCTAT ATAGACGAAG TGAAAAACGG AGTATTTCCA ACAGAAAAAA ATTCTTTTAA AGTGGATGAT TGGATTATTG ATGAGCTTGA TAAAGTTAGG TTTGACATTT AG
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Protein sequence | MNDKFTTASF LESKKQGRKI TMLTAYDYPT AKILDEAGVD SILVGDSLGM VVLGYEDTTR VTMDDMVHHT KAVVRGVKRA MVVADMPFLS YHTGKNDSVR NAGRLVSEGG CKAVKLEGGE DIIENVKAII SAGIPVVGHL GYTPQSINVF GGHKAQGKTI DTAKKIYRDA LLLQKAGVFA VVLECVPYKL AAFISKRLDI PTIGIGSGPD CDGQVLVIHD LTGMFKDFTP KHVKKYAEIG ETVSTAVKSY IDEVKNGVFP TEKNSFKVDD WIIDELDKVR FDI
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