Gene Cthe_0902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0902 
Symbol 
ID4810523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1078655 
End bp1079506 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content42% 
IMG OID640106321 
Product3-methyl-2-oxobutanoate hydroxymethyltransferase 
Protein accessionYP_001037329 
Protein GI125973419 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0413] Ketopantoate hydroxymethyltransferase 
TIGRFAM ID[TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000633792 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGACA AATTTACAAC GGCAAGCTTT TTGGAATCAA AAAAACAAGG TAGAAAAATT 
ACAATGCTTA CAGCCTATGA CTACCCAACG GCTAAAATTT TGGATGAAGC AGGAGTGGAC
TCAATACTGG TCGGGGATTC TCTTGGAATG GTAGTCCTGG GATATGAGGA TACTACGCGG
GTGACGATGG ATGACATGGT TCATCACACA AAAGCTGTTG TGCGGGGAGT AAAAAGGGCA
ATGGTTGTTG CAGACATGCC GTTTTTATCC TACCATACAG GAAAAAACGA CAGTGTAAGA
AATGCCGGAA GACTTGTGTC CGAAGGGGGC TGCAAGGCTG TAAAACTTGA AGGCGGCGAG
GATATAATTG AAAACGTGAA GGCCATCATC AGTGCCGGAA TACCCGTAGT CGGACATCTT
GGATATACAC CCCAGTCAAT AAATGTTTTC GGAGGACACA AGGCTCAGGG AAAAACTATT
GACACAGCAA AGAAAATATA CCGGGATGCA CTTTTGTTGC AAAAAGCAGG GGTTTTTGCC
GTGGTTTTGG AGTGTGTGCC GTATAAACTT GCGGCTTTTA TTTCAAAGAG ATTGGATATA
CCCACAATAG GAATTGGGTC CGGTCCGGAC TGTGACGGAC AGGTTCTTGT CATACATGAT
TTGACAGGTA TGTTTAAGGA TTTTACTCCA AAGCATGTTA AAAAGTACGC TGAGATTGGA
GAAACTGTAT CCACGGCGGT AAAAAGCTAT ATAGACGAAG TGAAAAACGG AGTATTTCCA
ACAGAAAAAA ATTCTTTTAA AGTGGATGAT TGGATTATTG ATGAGCTTGA TAAAGTTAGG
TTTGACATTT AG
 
Protein sequence
MNDKFTTASF LESKKQGRKI TMLTAYDYPT AKILDEAGVD SILVGDSLGM VVLGYEDTTR 
VTMDDMVHHT KAVVRGVKRA MVVADMPFLS YHTGKNDSVR NAGRLVSEGG CKAVKLEGGE
DIIENVKAII SAGIPVVGHL GYTPQSINVF GGHKAQGKTI DTAKKIYRDA LLLQKAGVFA
VVLECVPYKL AAFISKRLDI PTIGIGSGPD CDGQVLVIHD LTGMFKDFTP KHVKKYAEIG
ETVSTAVKSY IDEVKNGVFP TEKNSFKVDD WIIDELDKVR FDI