Gene Cthe_0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0888 
Symbol 
ID4810506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp1064617 
End bp1065318 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content39% 
IMG OID640106304 
Producttype IV pilus assembly PilZ 
Protein accessionYP_001037315 
Protein GI125973405 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.552187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAATG TCGAGTTGTC TAATTGGATT CCGGTTCAGA GAGAAGAATA TGTGTTGTCT 
GTCAAGGAAA AGGAAGAGAT TTTCAGACGG GGAGCGGTTA TCAGCATTAA GCATGGTTAT 
ATTTTTGAAC CGGTCCTGTC AGTCATCCAA AAGTGCGAAG GCGAGTGCAT CTATTTTAGA 
ATTCCTGAAG AGTTCTTAAA GAATAATGTG TTTAAAGGTG ATGTTGTTTC CTGCCAGGTT 
ATGCAGGGGG AGTATGAATA TATTGTTAGC GGGATAATAA GTGAGTTTGA AATAACTTAT 
CCGTGGTTGG TCGAGGTTGC AATAAAAAGG GTCAGCAAAG TGAAGAACAA CAGAGGGGCT 
AAAAGATACC TTGTTAATTT TCAGTCAAGA TTTTATCCAA AGGGATCGGA TAACGGGATA 
TATGCCATAA TTAAAAATAT CAGTCTGACG GGTGTTGGAG CGGTTTTCAG GGAAGAAGTC 
CAGCCCCATA GTCTTGTGAA TGTGTTTGTA AGTGCTTCGG TTGACAAAGT TCAGTCTTTG 
GAATTCAAGG CAAAAATAAA CAGGATTGTA AACAGGGAGA TATACAACGA ATATGGTTTG 
GAAATTGTGG AAATAGATGA AGTTAACAAG GACAAACTTG ATAAATTGAT TTACCGTCTG 
GAGTGTAATG AAGCCGAATT TGTATCCAAC AGTCTTAAAT GA
 
Protein sequence
MMNVELSNWI PVQREEYVLS VKEKEEIFRR GAVISIKHGY IFEPVLSVIQ KCEGECIYFR 
IPEEFLKNNV FKGDVVSCQV MQGEYEYIVS GIISEFEITY PWLVEVAIKR VSKVKNNRGA 
KRYLVNFQSR FYPKGSDNGI YAIIKNISLT GVGAVFREEV QPHSLVNVFV SASVDKVQSL 
EFKAKINRIV NREIYNEYGL EIVEIDEVNK DKLDKLIYRL ECNEAEFVSN SLK