| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0884 |
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| Symbol | |
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| ID | 4810502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1060128 |
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| End bp | 1060694 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640106300 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_001037311 |
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| Protein GI | 125973401 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.10912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTTTCACA GATTAAAAAG AAGTTTCAAG TTGTTTTTTG TTTTTGCGGT GGCATTGATT
TCAATTATAT TCATTCTGGA AGGAACTGTT AAAATGCTAT TTCCTTTGAA ATATAAGGAA
TATGTTTACA AATATTCTTC TGAATATAAT TTAGATCCGT ACCTTGTTTT TTCAATTATA
AAGGCGGAAA GCAGTTTCAA TCCCAATGCG ACCTCGCATA AAAACGCCCG TGGTCTTATG
CAGCTGACTG ATGAAACAGC ACTTTGGATT GCGGAAATGA TGGGGCTGGA GAATTTTAAG
GTGGAATATT TATATGACCC TGAGACGAAC ATAAAATTTG GATGCTGGCT TTTGAACAAC
CTGGAAAAGC AGTTTGACAG CCGTATTCTT GTGGTGGCAT CATACAATGC CGGTGCCGCA
TGTGTGCATT CCTGGCTGAA AGACAGCAAG TACAGCAAAA CGGGAAAGAC TCTTGATGTC
ATACCTTACA AGGAAACTGA GATTTATACC AAAAGGGTGG AGAATTACTA CAGTATTTAT
AAAATGCTTT ACGAAAAAGA TGTTTAG
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| Protein sequence | MFHRLKRSFK LFFVFAVALI SIIFILEGTV KMLFPLKYKE YVYKYSSEYN LDPYLVFSII
KAESSFNPNA TSHKNARGLM QLTDETALWI AEMMGLENFK VEYLYDPETN IKFGCWLLNN
LEKQFDSRIL VVASYNAGAA CVHSWLKDSK YSKTGKTLDV IPYKETEIYT KRVENYYSIY
KMLYEKDV
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