| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0880 |
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| Symbol | |
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| ID | 4810498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 1056027 |
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| End bp | 1057043 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640106296 |
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| Product | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase |
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| Protein accession | YP_001037307 |
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| Protein GI | 125973397 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2876] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR01361] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000574615 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTATCG TTATGAGTCC AAATGCTACA AAAGAGCAGA TTGAAAATGT GGAAAAAAAA
CTTTTGGAGC TGGGTTTTAA AACTCATCCC ATAGTCGGAG ACGTAAAAAC GGTAATTGGG
GCTATCGGAG ACAAAAGACT TCTCAATACC CACTCCATAT CCACCATGCC CGGAGTTGAA
AGCATTGTTC CAATCATGAA ACCTTACAAG CTGGCCAGCA AAGAACTAAA GCAGGAACCA
ACCATTGTTG AGGTAGGCGA TGTACGAATT GGTGGCAATG AAGTAGTGGT TATGGCCGGC
CCCTGTGCAA TTGAAAACGA AGAAATTTAT GTCGAAACAG CCAAAAAGGT TAAAGAGGCA
GGAGCCAAAA TACTCCGCGG CGGTGCTTTC AAGCCCCGTA CATCTCCTTA TTCTTTCCAA
GGTTTGGAAG AAGAAGGCCT CAAAATAATG GCCATTGCCC GGGAAGTAAC GGGACTTAAG
CTTGTCACCG AAGTTGTGGA CACAAGAGAT GTGGAACTTG TCGCATCTTA TACAGACATC
ATCCAAATCG GTGCAAGAAA CATGCAAAAC TTCAGGCTGC TTAAAGAGGT CGGAATGTCC
AATAAGCCCG TACTCCTAAA AAGAGGACTG GCTGCAACCA TTGAAGAATG GTTAATGGCC
GCCGAATATA TTATTTCCGA GGGTAATCCC AATGTAATAC TTTGCGAACG AGGCATCCGA
ACCTTCGAGA CAGCCACAAG GAACACCATT GACATGAGCG CCATTCCGGT AATAAAAGAG
CTGTCCCATT TGCCGATAGT GCTTGACCCC AGCCATGCGG CAGGTACCTG GAAATATGTT
GAGCCTCTTG CAAAAGGCGC AATAGCAACC GGAGCCGACG GTTTAATCAT TGAAGTCCAC
AGCCAGCCTG ACTGTGCTCT CTGTGACGGT CAACAGTCTT TGATACCTTC AAGGTTCGAA
CAGCTTATGA AGGATCTTGA GCCTATAGCT CTTGCAGTGG GAAGAAAACT ATTGTAA
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| Protein sequence | MIIVMSPNAT KEQIENVEKK LLELGFKTHP IVGDVKTVIG AIGDKRLLNT HSISTMPGVE
SIVPIMKPYK LASKELKQEP TIVEVGDVRI GGNEVVVMAG PCAIENEEIY VETAKKVKEA
GAKILRGGAF KPRTSPYSFQ GLEEEGLKIM AIAREVTGLK LVTEVVDTRD VELVASYTDI
IQIGARNMQN FRLLKEVGMS NKPVLLKRGL AATIEEWLMA AEYIISEGNP NVILCERGIR
TFETATRNTI DMSAIPVIKE LSHLPIVLDP SHAAGTWKYV EPLAKGAIAT GADGLIIEVH
SQPDCALCDG QQSLIPSRFE QLMKDLEPIA LAVGRKLL
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