Gene Cthe_0871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0871 
Symbol 
ID4810489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp1045182 
End bp1045838 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content42% 
IMG OID640106287 
Productphosphoribosylanthranilate isomerase 
Protein accessionYP_001037298 
Protein GI125973388 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0135] Phosphoribosylanthranilate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0108094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTGTG TTAAGATTTG CGGTTTAAGA AGAAAAGAAG ACATAGATTA TGTAAATCTC 
TACAAACCTC AATTTGCAGG TTTTGTATTT GCAGAAAGCC GCCGGAAGGT TTCGAAAGAG 
ACAGCAAGGA TGCTTGTAAA AGCTCTTTTG CCCCAAATTA AGTCTGTGGG GATATTTGTA 
AATGAAAAAA AAGAAACAGT GGCTGAGATT GTGAAGTACA CAGGACTTGA CTGTGTACAG 
CTTCATGGAG ACGAGACGCC GGAATATGTG GAAAAGCTTA AGGAACTTCT TGGCAGGATA 
ACGGAAAAAA GAATTGAAAT ATGGAAGGCA GTTCGGGTAA AAAACAAAGA ATCCCTTGAA 
ATTATTTCTG AGTTTGATGT GGATGCTTTT CTTTTGGATG CTTATGTTGA GGGAAGCTAT 
GGAGGAGCCG GGGCTGTGTT TGACTGGCAG CTGGCTGCGG ATGTGGCGGC AGGACATGAG 
AGGATTATCC TTGCCGGTGG TCTTAATCCG GAAAATGTCA AGACGGCAGT GGCAAAGGTA 
AAACCTTATG GAGTCGATGT CAGCAGCGGT GTTGAGACTG ACGGTTTCAA AGATGCTGAA 
AAGATAAGGG ATTTTATTAT GAAAGTAAGA GAAGCGGATG GTGGGGTATT ATCATAA
 
Protein sequence
MTCVKICGLR RKEDIDYVNL YKPQFAGFVF AESRRKVSKE TARMLVKALL PQIKSVGIFV 
NEKKETVAEI VKYTGLDCVQ LHGDETPEYV EKLKELLGRI TEKRIEIWKA VRVKNKESLE 
IISEFDVDAF LLDAYVEGSY GGAGAVFDWQ LAADVAAGHE RIILAGGLNP ENVKTAVAKV 
KPYGVDVSSG VETDGFKDAE KIRDFIMKVR EADGGVLS