Gene Cthe_0868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0868 
Symbol 
ID4810486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1042845 
End bp1043555 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content35% 
IMG OID640106284 
Producttype IV pilus assembly PilZ 
Protein accessionYP_001037295 
Protein GI125973385 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000129283 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGA TAAAATTACG GGATTTTCTT TCAGAAGGCG CTATAATCAG GACAAAGCAT 
TGCAATTCAA CCAACTGGGT GACCAACGTC GTTTATGCCA TTAATGAGGA CTGGATTGAG
GTAGATATCG GCCTTGAAAA GGATTATATT GACAACATAA TTATGATTGG AGATACAATG
AGATGCAAAT ACAGTACTGA TGAGTATGAG TTTATGTTAA TTGGCTGGGT AACAAAAATA
AAGCTTGAAG AACCGCAGAG TATTACCATC AAGATTCATG ATGTCGAAAG ATTTGCAAAC
AGACGTGACA ACTACAGATA CGATATATAT TTGTGCTCAG TCATAAAGGC AAACAGAAAT
GACGAAAAAG GCGTGTTTGC CATCATGACT AATCTAAGCC AGGGCGGGGC TGCTTTTATT
GCCAAGGAAG ATATCGAAAA AGAACTGGAA ACGGCTTATA ATATGCAGGA GGAGAAAAAT
TATTATTTTG AAGTATTTAT TACTCCTAAA AAACAACTGT GTTTTACCGG TACCGTGAAA
AGAAAAACGA GTAATGAAAA AGGATTTGAG TATGGTGTAA AAATTTTCGA TATTGATTTT
CAAAATGAAA AAACTCTGAA CGAGTTGTTG GATGAGCTTG AAAAAAAAGA TAAAGAGTTC
TATAATAAAC GAAGTAGCTT TTGGTCGAAG AATAGCAAAT ATAATAAATA A
 
Protein sequence
MSKIKLRDFL SEGAIIRTKH CNSTNWVTNV VYAINEDWIE VDIGLEKDYI DNIIMIGDTM 
RCKYSTDEYE FMLIGWVTKI KLEEPQSITI KIHDVERFAN RRDNYRYDIY LCSVIKANRN
DEKGVFAIMT NLSQGGAAFI AKEDIEKELE TAYNMQEEKN YYFEVFITPK KQLCFTGTVK
RKTSNEKGFE YGVKIFDIDF QNEKTLNELL DELEKKDKEF YNKRSSFWSK NSKYNK