Gene Cthe_0865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0865 
Symbol 
ID4810483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1040720 
End bp1041466 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content44% 
IMG OID640106281 
Product3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) 
Protein accessionYP_001037292 
Protein GI125973382 
COG category[C] Energy production and conversion 
COG ID[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00159383 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCAG TTTTTAAGAA ACCACATGCT TTAGTAGATG TGTCCATGCA TTATTGTCCC 
GGATGTACTC ACGGGATAGT TCATAGACTT ATAGCCGAGG TTATAGATGA GCTTGATATT
GAAGGAAAGA CAATAGGTGT TTCACCTGTT GGCTGTGCCT ACAACAACTA TGAGTATTTT
AATTGTGATA TGATTCAGGC AGCCCATGGA AGGGCTCCGG CGGTTGCGAC CGGGGCAAAA
AGGGTTAATC CCGACAATGT TGTGTTCGCC TATCAGGGGG ACGGAGATTT GGCCGCGATA
GGTACGGCAG AGATTGTCCA TGCAGCTACA AGGGGCGAAA AAATAACGGT TATTTTTATA
AACAATGCCA TTTACGGAAT GACATCGGGA CAGATGGCTC CCACCACCTT GATTGATCAG
GTTACGACCA CAACTCCTTT TGGAAGAAAG CCGGAGGTTC ACGGATATCC GATAAATGTT
TGTGAACTTT TGTCCACACT TGAGGGCGCG GTATATGTTG AGAGAGTTTC GGTGCATGAC
ATAAAAAATA TTATGAATGC AAAGAAGGCA ATAAAGAAGG CATTTAAAGT TCAGATGGCA
AACCTGGGTT TCTCGATTGT TGAAGTGCTG TCATCCTGTC CGACAAACTG GGGATTAAGT
CCTGTGGAAG CATTGAAATG GATAGAGGAG AAGATGATTC CGGTTTATCC GTTGGGCAAT
TACAAAGGCA AGGATTTGGA GGTGTAA
 
Protein sequence
MNAVFKKPHA LVDVSMHYCP GCTHGIVHRL IAEVIDELDI EGKTIGVSPV GCAYNNYEYF 
NCDMIQAAHG RAPAVATGAK RVNPDNVVFA YQGDGDLAAI GTAEIVHAAT RGEKITVIFI
NNAIYGMTSG QMAPTTLIDQ VTTTTPFGRK PEVHGYPINV CELLSTLEGA VYVERVSVHD
IKNIMNAKKA IKKAFKVQMA NLGFSIVEVL SSCPTNWGLS PVEALKWIEE KMIPVYPLGN
YKGKDLEV