Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0865 |
Symbol | |
ID | 4810483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1040720 |
End bp | 1041466 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640106281 |
Product | 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) |
Protein accession | YP_001037292 |
Protein GI | 125973382 |
COG category | [C] Energy production and conversion |
COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00159383 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGCAG TTTTTAAGAA ACCACATGCT TTAGTAGATG TGTCCATGCA TTATTGTCCC GGATGTACTC ACGGGATAGT TCATAGACTT ATAGCCGAGG TTATAGATGA GCTTGATATT GAAGGAAAGA CAATAGGTGT TTCACCTGTT GGCTGTGCCT ACAACAACTA TGAGTATTTT AATTGTGATA TGATTCAGGC AGCCCATGGA AGGGCTCCGG CGGTTGCGAC CGGGGCAAAA AGGGTTAATC CCGACAATGT TGTGTTCGCC TATCAGGGGG ACGGAGATTT GGCCGCGATA GGTACGGCAG AGATTGTCCA TGCAGCTACA AGGGGCGAAA AAATAACGGT TATTTTTATA AACAATGCCA TTTACGGAAT GACATCGGGA CAGATGGCTC CCACCACCTT GATTGATCAG GTTACGACCA CAACTCCTTT TGGAAGAAAG CCGGAGGTTC ACGGATATCC GATAAATGTT TGTGAACTTT TGTCCACACT TGAGGGCGCG GTATATGTTG AGAGAGTTTC GGTGCATGAC ATAAAAAATA TTATGAATGC AAAGAAGGCA ATAAAGAAGG CATTTAAAGT TCAGATGGCA AACCTGGGTT TCTCGATTGT TGAAGTGCTG TCATCCTGTC CGACAAACTG GGGATTAAGT CCTGTGGAAG CATTGAAATG GATAGAGGAG AAGATGATTC CGGTTTATCC GTTGGGCAAT TACAAAGGCA AGGATTTGGA GGTGTAA
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Protein sequence | MNAVFKKPHA LVDVSMHYCP GCTHGIVHRL IAEVIDELDI EGKTIGVSPV GCAYNNYEYF NCDMIQAAHG RAPAVATGAK RVNPDNVVFA YQGDGDLAAI GTAEIVHAAT RGEKITVIFI NNAIYGMTSG QMAPTTLIDQ VTTTTPFGRK PEVHGYPINV CELLSTLEGA VYVERVSVHD IKNIMNAKKA IKKAFKVQMA NLGFSIVEVL SSCPTNWGLS PVEALKWIEE KMIPVYPLGN YKGKDLEV
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