Gene Cthe_0834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0834 
Symbol 
ID4810452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1014851 
End bp1015288 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content40% 
IMG OID640106251 
ProductNusB antitermination factor 
Protein accessionYP_001037262 
Protein GI125973352 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000205834 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAGAA GAGCATCCAG GGAAATTGCC ATGAAGCTTA TATATCAGCT TGAAATACAA 
AAAGACTCAA GGGAGGAACA AATAAACAAC ACCCTGGAAC AATATGATTT GAACGAAAAT
GACAGGGAAT ATATTCTCGA TGTTGTAAAA GGAGTTTTTA AAAATCAGGA AGAGATAGAC
GGCACCATAG AAAAGTTTTC GAAAGGATGG AAACTGTCCA GAATTTCAAA GGTTGACCTT
GCAATTTTAA GGCTTGCCAT ATATGAAATG TGCCATAGGG ATGACATACC GTTCACCGTG
GCCATCAACG AGGCTGTCGA ACTGGCAAAG AACTACAGCG GGGAAGAAAG CGGCTCCTTT
ATAAACGGAA TTTTGGGGAA AGTTGTCAAA GTGAAACTTA TGTCAGCAGA CGGAAATGAG
AACAGAGACG AGGAATAA
 
Protein sequence
MGRRASREIA MKLIYQLEIQ KDSREEQINN TLEQYDLNEN DREYILDVVK GVFKNQEEID 
GTIEKFSKGW KLSRISKVDL AILRLAIYEM CHRDDIPFTV AINEAVELAK NYSGEESGSF
INGILGKVVK VKLMSADGNE NRDEE