Gene Cthe_0825 details

Gene Information

• Locus tag: Cthe_0825
• ID: 4810443
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: -
• Start bp: 1004283
• End bp: 1006232
• Gene Length: 1950 bp
• Protein Length: 649 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 640106242
• Product: glycoside hydrolase family protein
• Protein accession: YP_001037253
• Protein GI: 125973343

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAGAA TGACCTTGAA AAGCAGCATG AAAAAACGTG TGTTATCTTT GCTCATTGCT 
GTAGTGTTTC TAAGCTTGAC CGGAGTATTT CCTTCGGGAT TGATTGAGAC CAAAGTGTCA 
GCTGCAAAAA TAACGGAGAA TTATCAATTT GATTCACGAA TCCGTTTAAA CTCAATAGGT 
TTTATACCGA ACCACAGCAA AAAGGCGACT ATAGCTGCAA ATTGTTCAAC CTTTTATGTT 
GTTAAAGAAG ACGGAACAAT AGTGTATACC GGAACGGCAA CTTCAATGTT TGACAATGAT 
ACAAAAGAAA CTGTTTATAT TGCTGATTTT TCATCTGTTA ATGAAGAAGG AACGTACTAT 
CTTGCCGTGC CGGGAGTAGG AAAAAGCGTA AACTTTAAAA TTGCAATGAA TGTATATGAG 
GATGCTTTTA AAACAGCAAT GCTGGGAATG TATTTGCTGC GCTGCGGCAC CAGTGTGTCG 
GCCACATACA ACGGAATACA CTATTCCCAT GGACCGTGCC ATACTAATGA TGCATATCTT 
GATTATATAA ACGGACAGCA TACTAAAAAA GACAGTACAA AAGGCTGGCA TGATGCGGGC 
GACTACAACA AATATGTGGT AAACGCCGGC ATAACCGTTG GTTCAATGTT CCTGGCGTGG 
GAGCATTTTA AAGACCAGTT GGAGCCTGTG GCATTGGAGA TTCCCGAAAA GAACAATTCA 
ATACCGGATT TTCTTGATGA ATTAAAATAT GAGATAGACT GGATTCTTAC CATGCAATAC 
CCTGACGGGA GCGGAAGGGT GGCTCATAAA GTTTCGACAA GGAACTTTGG CGGCTTTATC 
ATGCCTGAGA ACGAACACGA CGAAAGATTT TTCGTGCCCT GGAGCAGTGC CGCAACGGCA 
GACTTTGTTG CCATGACGGC CATGGCTGCA AGAATATTCA GGCCTTATGA TCCTCAATAT 
GCTGAAAAAT GTATAAATGC GGCAAAAGTA AGCTATGAGT TTTTGAAGAA CAATCCTGCG 
AATGTTTTTG CAAACCAGAG TGGATTCTCA ACAGGAGAAT ATGCCACTGT CAGTGATGCA 
GATGACAGAT TGTGGGCGGC GGCTGAAATG TGGGAGACCC TGGGAGATGA AGAATACCTT 
AGAGATTTTG AAAACAGGGC GGCGCAATTC TCGAAAAAAA TAGAAGCCGA TTTTGACTGG 
GATAATGTTG CAAACTTAGG TATGTTTACA TATCTTTTGT CAGAAAGACC GGGCAAGAAT 
CCTGCTTTGG TGCAGTCAAT AAAGGATAGT CTCCTTTCCA CTGCGGATTC AATTGTGAGG 
ACCAGCCAAA ACCATGGCTA TGGCAGAACC CTTGGTACAA CATATTACTG GGGATGCAAC 
GGCACGGTTG TAAGACAGAC TATGATACTT CAGGTTGCGA ACAAGATTTC ACCCAACAAT 
GATTATGTAA ATGCTGCTCT CGATGCGATT TCACATGTAT TTGGAAGAAA CTATTACAAC 
AGGTCTTATG TAACAGGCCT TGGTATAAAT CCTCCTATGA ATCCTCATGA CAGACGTTCA 
GGGGCTGACG GAATATGGGA GCCGTGGCCC GGTTACCTTG TAGGAGGAGG ATGGCCCGGA 
CCGAAGGATT GGGTGGATAT TCAGGACAGT TATCAGACCA ATGAAATTGC TATAAACTGG 
AATGCGGCAT TGATTTATGC CCTTGCCGGA TTTGTCAACT ATAATTCTGC TCAAAATGAA 
GTACTGTACG GAGATGTGAA TGATGACGGA AAAGTAAACT CCACTGACTT GACTTTGTTA 
AAAAGATATG TTCTTAAAGC CGTCTCAACT CTGCCTTCTT CCAAAGCTGA AAAGAACGCA 
GATGTAAATC GTGACGGAAG AGTTAATTCC AGTGATGTCA CAATACTTTC AAGATATTTG 
ATAAGGGTAA TCGAGAAATT ACCAATATAA 

 

Protein sequence

MSRMTLKSSM KKRVLSLLIA VVFLSLTGVF PSGLIETKVS AAKITENYQF DSRIRLNSIG 
FIPNHSKKAT IAANCSTFYV VKEDGTIVYT GTATSMFDND TKETVYIADF SSVNEEGTYY 
LAVPGVGKSV NFKIAMNVYE DAFKTAMLGM YLLRCGTSVS ATYNGIHYSH GPCHTNDAYL 
DYINGQHTKK DSTKGWHDAG DYNKYVVNAG ITVGSMFLAW EHFKDQLEPV ALEIPEKNNS 
IPDFLDELKY EIDWILTMQY PDGSGRVAHK VSTRNFGGFI MPENEHDERF FVPWSSAATA 
DFVAMTAMAA RIFRPYDPQY AEKCINAAKV SYEFLKNNPA NVFANQSGFS TGEYATVSDA 
DDRLWAAAEM WETLGDEEYL RDFENRAAQF SKKIEADFDW DNVANLGMFT YLLSERPGKN 
PALVQSIKDS LLSTADSIVR TSQNHGYGRT LGTTYYWGCN GTVVRQTMIL QVANKISPNN 
DYVNAALDAI SHVFGRNYYN RSYVTGLGIN PPMNPHDRRS GADGIWEPWP GYLVGGGWPG 
PKDWVDIQDS YQTNEIAINW NAALIYALAG FVNYNSAQNE VLYGDVNDDG KVNSTDLTLL 
KRYVLKAVST LPSSKAEKNA DVNRDGRVNS SDVTILSRYL IRVIEKLPI