Gene Cthe_0823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0823 
Symbol 
ID4810441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1000407 
End bp1001921 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content46% 
IMG OID640106240 
Producthypothetical protein 
Protein accessionYP_001037251 
Protein GI125973341 
COG category[L] Replication, recombination and repair 
COG ID[COG4584] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAAA TCAAGGATAT CAGAAAAATG TATTTTGAGG AAGGGAAAAA TATCAGCCAG 
ATAGCCAGAG AAACCGGCCA TGATCGCAAA ACGGTGAGAG CATATCTTGA CAAAGTGGAC
TGGAACCAGA AGCCACCGAA AGTGAAGAAG GAAACAGCCT TTCCGAAACT TAATCCATAC
AAGGATGACA TTGACACATG GCTAAACGAG GATAAAAAGG CCAGGCGCAA GCAAAGACAT
ACAGCAAAAC GAATATACAA CCGGCTGGTG GAAAAGTACG GAGAACGCTT CAACTGTTCC
TACAGGACCG TAGCAGGATA TGTAGCTGTG AAGAAAAAAG AGATATTCAA CGCAAGGGAA
GGATTCCTGC CTTTAGAGCA CGTACCAGGT GAAGCCCAGG CAGACTTTGG CGATGCTGAC
TTTTATGAAA ATGGCAGGCA CTACAGGGGT AAAAGTCTGA CTTTATCATT TCCCCACAGC
AACAAAGGAT ATACCCAGCT ATTCAAGGGA GAGAACCAGG AATGCCTGTT CGAGGGCTTG
AAGGCGATAT TTGAGCACAT AGGTGGAGTG CCGCCAAGGA TATGGTTTGA TAATGCCAGC
ACCATAGTAG CTAAGGTAAT AAAGGGCGGA GGCAGGAACC TGACAGATGA TTTCATGCGT
TTCATGGAGC ATTACCGTTT CAAAGCAGTA TTCTGCAATG TAGATGCCGG GCATGAAAAA
GGCAATGTGG AGAACAAGGT CGGCTATCAC AGGAGAAACA TGCTGGTGCC GGTACCACGT
TTTGAAGACA TTAGTGAATT CAACAAAGAA CTCCTGATTA GGTGTGAAGA AGATGCCAAA
AGGCAGCATT ACCGAAAGAA CGGTACGATC GAAGAACTAT ACAGGGATGA TAAGGCAGCC
CTGCTGGAGC TGCCCAAGAC AACTTTTGAT ACAAGCAAAT ACATAACAGT GAAGACAAAC
GGATATGGCA AATTTCTGCT CAACAAAGGC CTGCACGAAT ATTCCTCAGC GCCAAAATTC
GCAAACAAAT ATGTACTGGT CAGGCTGACT GCCTTTCATG TAACAGTGCT TGACGAAAGC
CATCGGGAGA TAGTGCGTCA TGAGAGACTC TACGGCGACT ACAAGCAGCA AAGCATGCAA
TGGCTGCCAT ATCTGACTCA GCTGGCACGG CGACCGGGGG CATTGAAATA CACAGGTATA
TATCAGATGC TGCCACAGCC TGTGAAAGAA TACATGGAAG AGCTAAGCAA GCAAGACAGA
GGGAAAGTAT TAAGAGTAAT TGCTGATCTG ACACAGAAGA GCAGCTTCGA AAAGGCCATT
AAGACTGTCA GTACTGCCCT GTCCTATGGT GCTGCCGATG TGGACAGCCT GATAAATCTG
CACAGATATT TGTATGAAAA AGTGCTGCAG CTGGAGCCGA TACATTTGCC CGAGCATATA
CCTCACTTAA ACAGATATGT GCCTGATTTT ATGGCATATG ACAGAAGTCT CAAGGCAGGT
GAAGAAAAAT GCTGA
 
Protein sequence
MTQIKDIRKM YFEEGKNISQ IARETGHDRK TVRAYLDKVD WNQKPPKVKK ETAFPKLNPY 
KDDIDTWLNE DKKARRKQRH TAKRIYNRLV EKYGERFNCS YRTVAGYVAV KKKEIFNARE
GFLPLEHVPG EAQADFGDAD FYENGRHYRG KSLTLSFPHS NKGYTQLFKG ENQECLFEGL
KAIFEHIGGV PPRIWFDNAS TIVAKVIKGG GRNLTDDFMR FMEHYRFKAV FCNVDAGHEK
GNVENKVGYH RRNMLVPVPR FEDISEFNKE LLIRCEEDAK RQHYRKNGTI EELYRDDKAA
LLELPKTTFD TSKYITVKTN GYGKFLLNKG LHEYSSAPKF ANKYVLVRLT AFHVTVLDES
HREIVRHERL YGDYKQQSMQ WLPYLTQLAR RPGALKYTGI YQMLPQPVKE YMEELSKQDR
GKVLRVIADL TQKSSFEKAI KTVSTALSYG AADVDSLINL HRYLYEKVLQ LEPIHLPEHI
PHLNRYVPDF MAYDRSLKAG EEKC