| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0819 |
|---|
| Symbol | |
|---|
| ID | 4810437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 993793 |
|---|
| End bp | 994656 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640106236 |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_001037247 |
|---|
| Protein GI | 125973337 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.989778 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTGA AAATAGAGGG CCTGTCAAAA AGCTACAAAA AGAAAAAAGC TCTTGATTCT
GTCAACTTGT TTATTTCAAA CGGAATCTAC GGTCTTTTGG GACCCAACGG TGCCGGAAAG
ACAACTCTGA TGAGGATTCT TGCCGGGCTT ATAGCGCCGG ATGAAGGGAG AATTGAATTT
GACGGGGAAG ATGTGCTGAA AAATATGGAC AAATTTCGCT ACAAGATAGG CTATTTACCT
CAGGAATTCG GGTGCTACAA GAGTATAACG GTTGAAGAGT GCCTGGATAC GATAGGTGTT
TTAAAGGGAA TAAGGGCTCC GGAGCGGAAA AAGCAAATAG AACAGGTTCT TGCTGAGGTT
AATTTGAGTA ATGAGGCAAA GAAAAAAGTC GGAGCCCTGT CGGGAGGAAT GAGAAGAAGG
CTGGGAATTG CACAGGCTAT GCTGGGCAAT CCTGCATTTA TTATGGTTGA TGAACCTACA
GCTGGTCTGG ACCCTGAGGA GCGTATAAGG TTCAGAGGAT TTATAAGAAG AGTTGCCGCA
AACAGGGTTG TATTGCTGTC CACTCATATT ATTGAAGACA TTAAAAACAA TTGCGATGGA
CTGGCATTAA TAAATAACGG CAAGGTTAAG CAGTTTGACG GTTTTGAAGA ATTGGAAAAC
ATGGCAAAAG GGAAAGTATG GAAAATGGTT ATAAACAGTA ATGATTTTTA TAAAATAGAG
GGCAAGTACA AGATACTTTC AACAAACACC AATGCGGATA ATAATTTGGA AATTCGGGTT
TATTCCGAAG AAAAACCGTC GGAAGATGCG GAGGCGGTTC AACCAACGGT GGAGGAAGGT
TATTTGACAT GGATAAACGC GTAA
|
|---|
| Protein sequence | MRLKIEGLSK SYKKKKALDS VNLFISNGIY GLLGPNGAGK TTLMRILAGL IAPDEGRIEF
DGEDVLKNMD KFRYKIGYLP QEFGCYKSIT VEECLDTIGV LKGIRAPERK KQIEQVLAEV
NLSNEAKKKV GALSGGMRRR LGIAQAMLGN PAFIMVDEPT AGLDPEERIR FRGFIRRVAA
NRVVLLSTHI IEDIKNNCDG LALINNGKVK QFDGFEELEN MAKGKVWKMV INSNDFYKIE
GKYKILSTNT NADNNLEIRV YSEEKPSEDA EAVQPTVEEG YLTWINA
|
|---|
| |