Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0814 |
Symbol | |
ID | 4810432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 983728 |
End bp | 985440 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640106231 |
Product | DNA repair protein RecN |
Protein accession | YP_001037242 |
Protein GI | 125973332 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0497] ATPase involved in DNA repair |
TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTCCAAC GGTTGGAAAT TCAGAATGTA GCAATAATTG ACAAGGTTGA AATTGAGTTG GGAGATGGGC TCAATGTACT GACCGGCGAA ACCGGAGCGG GAAAGTCCAT CATAATTGAC TCAATAAATG CCATTTTAGG GCAAAGACTG TATAAAGACC TTATAAGAAC GGGCAGGGAC AAAGCCATTG TTGAAGCCGT CTTTCAGGTG GATAAAAAAA GGGTGGAAGA TTTGCTGGAG GATTTTGGAA TAGACTGGGA AGAAGACGGT ACTTTGGTTG TGTCCAGAGA GTTTACCACT TCAGGGAAGA ATACTTGCAG GATTAACGGC AGAATTGCAA CGGTGTCAAT GCTAAAACAA TTGGGAGAAA GGCTTATTGA TGTACATGGA CAGCATGACA ACCAATCCCT CTTAAGAACC GAAAGCCACA TCGATCTTCT GGATTCTTTT GCGTCTTCCA GGCTTCAAAG CTTGAAAGAT GAGTATTTAA AACATCTTGA AACATACCGG AAGATTAAAA GCAGGTTGAA GGAACTGACC GGTGACAAAA ATGAAAGGGA GCGTAAAATA GATATTCTCA AGTATCAGAT TGATGAAATA AAAAAGGCGA AGCTAAAGAC AGGTGAAGAA GAGGAACTTT CAAAACAGAG AGAACTTTTG GTGAATTCTG AAAAAATTAC AAACACTCTT TCCAATGCCT ATGAACTTTT AGGAAGCGGA GGCAAATTCG GAGAATCCGC ACTGGACATG ATAAACAAGG CTGCTTCGGA TTTTGGCGGT ATAGAGGAGT TTGATGCAAA ATATGATGAA CTTAAAAAAA GGATTGAGGC GGTTGCGATT GAACTTGATG ATATTGTCTC GGAAATCCGC AATTTGCGCG ATAATATGGA ATATGATCCA GACCTTCTTA TGCAGATTGA AAGCAGACTT GATGTATTAT ACAGGCTTAA AAAGAAATAT GGAGATTCGG TGGAAGAAAT CTTAGAGTAC AAGGATAAAA TAGAAAAGGA ACTGGATGAA ATTTTAAATA ATGAAGAAAT TGTAAATAAG TTAAATGAAG AGCTTTTGGA AGAAGACGGG AAGCTGTACC GACTGGCAAA GGAAATGAAC AATGAAAGGG TTAAGGCGTC AAAGCTTCTC GAAGAAAAAA TCGGCGAGGA GCTTAAAGAC CTGGAAAAGA AAAACACCAG TTTCAAGGTG AGAATAGATT TTGACGATTC AACGGAGAAT GGGGAAAGAA AATACAATAA CAACGGTCTT GACAGAGTGG AGTTTATGAT ATCCACCAAC GCTGGAGAGC CTTTGAAACC TTTGGCAAAG ATAGCTTCCG GCGGAGAAAT GTCGAGAGTG ATGCTTGCAA TAAAGACAAT TCTTGCAAAA GTGGACAAGA TACCCACAAT GATATTCGAC GAGATTGATA TTGGAATAAG CGGTGTTGCG GCTCAAAAAG TGGGAGAGAA GCTCTGTTAT ATTTCGAAAA ACCACCAGGT CATATCTGTA ACCCACTTGG CACAAATAGC CTGTATGGCG GACAATAACT ATTATATTGA CAAGGTAACC GAAAACGGCA ATACCAGGAC GGTGGTTAAA AAGCTTGATG AAAGGGGAAA GAGGGACGAA ATAGCAAGGA TCCTCGGTGG AGCGAGTATT ACGGACATAA CATTAAAGCA TGCTGAAGAA ATGCTTGACA AAGCAAAAGA ATTTAAGAAA TAA
|
Protein sequence | MLQRLEIQNV AIIDKVEIEL GDGLNVLTGE TGAGKSIIID SINAILGQRL YKDLIRTGRD KAIVEAVFQV DKKRVEDLLE DFGIDWEEDG TLVVSREFTT SGKNTCRING RIATVSMLKQ LGERLIDVHG QHDNQSLLRT ESHIDLLDSF ASSRLQSLKD EYLKHLETYR KIKSRLKELT GDKNERERKI DILKYQIDEI KKAKLKTGEE EELSKQRELL VNSEKITNTL SNAYELLGSG GKFGESALDM INKAASDFGG IEEFDAKYDE LKKRIEAVAI ELDDIVSEIR NLRDNMEYDP DLLMQIESRL DVLYRLKKKY GDSVEEILEY KDKIEKELDE ILNNEEIVNK LNEELLEEDG KLYRLAKEMN NERVKASKLL EEKIGEELKD LEKKNTSFKV RIDFDDSTEN GERKYNNNGL DRVEFMISTN AGEPLKPLAK IASGGEMSRV MLAIKTILAK VDKIPTMIFD EIDIGISGVA AQKVGEKLCY ISKNHQVISV THLAQIACMA DNNYYIDKVT ENGNTRTVVK KLDERGKRDE IARILGGASI TDITLKHAEE MLDKAKEFKK
|
| |