Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0810 |
Symbol | |
ID | 4810428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 977957 |
End bp | 980104 |
Gene Length | 2148 bp |
Protein Length | 715 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640106227 |
Product | CheA signal transduction histidine kinases |
Protein accession | YP_001037238 |
Protein GI | 125973328 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACTGATA ATGTTAGCCG TGAGCCGATG CTGGACATGT TTATATTTGA AACACTCCAG TTATTAGATC AGTTAGAGCA GTCTTTGATT AACAGTGAAA AAGAAAGTGG GTTTGAATCT TCGATAGATG AGATTTTCAG AATCATGCAT ACAATAAAAG GCTCAGCGGC AATGATGCTT TTTGACGATA TATCAAAACT TGCCCATTCT ATTGAAGATC TGTTCTTTTA CCTTCGCGAA GAAAAGCCTG AAAATGTTAA TTCGACAGAA ATTATTGATA TTGTGCTGAA CGGAGTTGAC TTTATAAAAA ATGAGACCGT TAAACTTGAA AACGGACAGG AACCGGACGG AGATGCCTCT GACCTTATAA AAGAAATAAG GGATTATCTG GGTAATTTAA AAAGTATAAA TAATGCCGGA AGTGATTCTC CTGATTCTGA GTCATCTCAT ACTTTGGAAG TTGAAAAAGA CCAAAAATAT TACATAAGCT CAAATAAAGC GGCGTCAACT CCCAAAAGTC ATAAATACGA AGCCGTCCTT AAATTTGAAG AACAGTGCGG TATGGAGAAC ATCAGGGCAT TTTCCGTAAT TCATGACTTA AAGGAAATAG CCGATGTGAA TTATTTCTAC CCTGAGGATG TCATTGACGG CGGCGGAAAA AGTGAAAATA GTGAGATCAT CCAGAAAGAT GGCTTCAGGG TGGTGTTCAG TACCGATTTA GGACTTGACG AGGTAAAAGA AAGACTGTCC CATACCATTT TGCTCAAAAG CCTCGACGTT TATGTAATAA ATGAAGATCT TGAGGATATA ATGGGCGATA TGCCGGATAC CCGGGAAACT GAGCTAAAAG AGCAAGAGCT GAAAATGGAC GGGAAAGCTA ATGTTTTGAA TGATTCTTCT CAAGCTTCGG AGCAAAACGA GCATTCTTCC GGCAGACAGC TTTCAAATGA GAAGAAAACA GGTCCGTCGG CAGATAATAC TGCATCTTCA AGCAAGCAAA GTGTTATAAG TGTTAACATA GCGAAACTTG ACAAATTAAT GGATTTGGTT GGAGAAATAG TCATCTCCGA AGCCATGGTA ACGCAGAATC CCGATCTTGA GGGCCTTCAG CTCGACAATT TTCACAAGGC AGCAAGACAG CTCAACAAGT TGACAAATGA GCTGCAGGAT GTGGTGATGT CAATTCGAAT GGTTCCCCTT TCAATGACTT TCCAAAAGAT GAACAGGATA GTCAGAGACA TGGGTAAGAA ATTAAACAAG TCAATAGAGC TGGAGATAAT CGGAGAGGAA ACCGAAGTTG ACAAAAATAT TATTGAACGT ATATCCGACC CCCTCATTCA TCTTATAAGA AATGCCGTGG ACCACGGGCT TGAAGATCCT GATGAGAGGG TGGCAAAGGG AAAACCTCCG GCGGGAAAGA TTACTCTTGA GGCAAAGAAT GCCGGAGGGG ATGTATGGAT ATTTGTAAAG GATGACGGAA GAGGACTTGA CCGGGAAAAA ATACTTAAAA AAGCAAGAGA AGCAGGACTT ATACACAAAC CGGAAAACGA GCTTACCGAT AAAGAAATAT ATTCATTTAT TTTTACTCCG GGCTTTTCAA CAAAGGAAAA TGTTACTGAA TTTTCCGGGC GCGGTGTGGG AATGGATATT GTAAGCAACA ACATCTCCAT GGTGGGTGGA ACGATTTTTG TTGACAGCGT GCCGGATAAT GGAACGACAA TTTCCATAAA GCTGCCTCTG ACACTGGCCA TTATCAACGG TATGAGTATC AAAGTCGGAA AATCCAGATA TACAATACCG ACCATATCAA TCAAAGAATC CTTTAAAGTG AAAAACGAAG CTGTAATTAC AGACTCTGAA GGCAATGAAA TGATCATGGT CAGAGGAGAG GTTTATCCTG TATTGAGACT TCACAAATTC TATAAAATCA ACACTGAGGT TACAAATATA AATGACGGAA TAATTGTTAT GGTTGAGAGC GACTCCAGGG TAATATGCAT ATTTGCGGAT GAACTTTTAG GAGAACAACA GGTGGTAGTC AAGGCACTGC CAAAGTATAT AAAGAAAGTA AAAGGTATCG GAGGTTGTAC GCTTTTAGGT GACGGAAGCA TAAGCCTGAT ATTGGATGTT GCAGGGTTAG TAAGCTAG
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Protein sequence | MTDNVSREPM LDMFIFETLQ LLDQLEQSLI NSEKESGFES SIDEIFRIMH TIKGSAAMML FDDISKLAHS IEDLFFYLRE EKPENVNSTE IIDIVLNGVD FIKNETVKLE NGQEPDGDAS DLIKEIRDYL GNLKSINNAG SDSPDSESSH TLEVEKDQKY YISSNKAAST PKSHKYEAVL KFEEQCGMEN IRAFSVIHDL KEIADVNYFY PEDVIDGGGK SENSEIIQKD GFRVVFSTDL GLDEVKERLS HTILLKSLDV YVINEDLEDI MGDMPDTRET ELKEQELKMD GKANVLNDSS QASEQNEHSS GRQLSNEKKT GPSADNTASS SKQSVISVNI AKLDKLMDLV GEIVISEAMV TQNPDLEGLQ LDNFHKAARQ LNKLTNELQD VVMSIRMVPL SMTFQKMNRI VRDMGKKLNK SIELEIIGEE TEVDKNIIER ISDPLIHLIR NAVDHGLEDP DERVAKGKPP AGKITLEAKN AGGDVWIFVK DDGRGLDREK ILKKAREAGL IHKPENELTD KEIYSFIFTP GFSTKENVTE FSGRGVGMDI VSNNISMVGG TIFVDSVPDN GTTISIKLPL TLAIINGMSI KVGKSRYTIP TISIKESFKV KNEAVITDSE GNEMIMVRGE VYPVLRLHKF YKINTEVTNI NDGIIVMVES DSRVICIFAD ELLGEQQVVV KALPKYIKKV KGIGGCTLLG DGSISLILDV AGLVS
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