Gene Cthe_0810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0810 
Symbol 
ID4810428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp977957 
End bp980104 
Gene Length2148 bp 
Protein Length715 aa 
Translation table11 
GC content40% 
IMG OID640106227 
ProductCheA signal transduction histidine kinases 
Protein accessionYP_001037238 
Protein GI125973328 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACTGATA ATGTTAGCCG TGAGCCGATG CTGGACATGT TTATATTTGA AACACTCCAG 
TTATTAGATC AGTTAGAGCA GTCTTTGATT AACAGTGAAA AAGAAAGTGG GTTTGAATCT
TCGATAGATG AGATTTTCAG AATCATGCAT ACAATAAAAG GCTCAGCGGC AATGATGCTT
TTTGACGATA TATCAAAACT TGCCCATTCT ATTGAAGATC TGTTCTTTTA CCTTCGCGAA
GAAAAGCCTG AAAATGTTAA TTCGACAGAA ATTATTGATA TTGTGCTGAA CGGAGTTGAC
TTTATAAAAA ATGAGACCGT TAAACTTGAA AACGGACAGG AACCGGACGG AGATGCCTCT
GACCTTATAA AAGAAATAAG GGATTATCTG GGTAATTTAA AAAGTATAAA TAATGCCGGA
AGTGATTCTC CTGATTCTGA GTCATCTCAT ACTTTGGAAG TTGAAAAAGA CCAAAAATAT
TACATAAGCT CAAATAAAGC GGCGTCAACT CCCAAAAGTC ATAAATACGA AGCCGTCCTT
AAATTTGAAG AACAGTGCGG TATGGAGAAC ATCAGGGCAT TTTCCGTAAT TCATGACTTA
AAGGAAATAG CCGATGTGAA TTATTTCTAC CCTGAGGATG TCATTGACGG CGGCGGAAAA
AGTGAAAATA GTGAGATCAT CCAGAAAGAT GGCTTCAGGG TGGTGTTCAG TACCGATTTA
GGACTTGACG AGGTAAAAGA AAGACTGTCC CATACCATTT TGCTCAAAAG CCTCGACGTT
TATGTAATAA ATGAAGATCT TGAGGATATA ATGGGCGATA TGCCGGATAC CCGGGAAACT
GAGCTAAAAG AGCAAGAGCT GAAAATGGAC GGGAAAGCTA ATGTTTTGAA TGATTCTTCT
CAAGCTTCGG AGCAAAACGA GCATTCTTCC GGCAGACAGC TTTCAAATGA GAAGAAAACA
GGTCCGTCGG CAGATAATAC TGCATCTTCA AGCAAGCAAA GTGTTATAAG TGTTAACATA
GCGAAACTTG ACAAATTAAT GGATTTGGTT GGAGAAATAG TCATCTCCGA AGCCATGGTA
ACGCAGAATC CCGATCTTGA GGGCCTTCAG CTCGACAATT TTCACAAGGC AGCAAGACAG
CTCAACAAGT TGACAAATGA GCTGCAGGAT GTGGTGATGT CAATTCGAAT GGTTCCCCTT
TCAATGACTT TCCAAAAGAT GAACAGGATA GTCAGAGACA TGGGTAAGAA ATTAAACAAG
TCAATAGAGC TGGAGATAAT CGGAGAGGAA ACCGAAGTTG ACAAAAATAT TATTGAACGT
ATATCCGACC CCCTCATTCA TCTTATAAGA AATGCCGTGG ACCACGGGCT TGAAGATCCT
GATGAGAGGG TGGCAAAGGG AAAACCTCCG GCGGGAAAGA TTACTCTTGA GGCAAAGAAT
GCCGGAGGGG ATGTATGGAT ATTTGTAAAG GATGACGGAA GAGGACTTGA CCGGGAAAAA
ATACTTAAAA AAGCAAGAGA AGCAGGACTT ATACACAAAC CGGAAAACGA GCTTACCGAT
AAAGAAATAT ATTCATTTAT TTTTACTCCG GGCTTTTCAA CAAAGGAAAA TGTTACTGAA
TTTTCCGGGC GCGGTGTGGG AATGGATATT GTAAGCAACA ACATCTCCAT GGTGGGTGGA
ACGATTTTTG TTGACAGCGT GCCGGATAAT GGAACGACAA TTTCCATAAA GCTGCCTCTG
ACACTGGCCA TTATCAACGG TATGAGTATC AAAGTCGGAA AATCCAGATA TACAATACCG
ACCATATCAA TCAAAGAATC CTTTAAAGTG AAAAACGAAG CTGTAATTAC AGACTCTGAA
GGCAATGAAA TGATCATGGT CAGAGGAGAG GTTTATCCTG TATTGAGACT TCACAAATTC
TATAAAATCA ACACTGAGGT TACAAATATA AATGACGGAA TAATTGTTAT GGTTGAGAGC
GACTCCAGGG TAATATGCAT ATTTGCGGAT GAACTTTTAG GAGAACAACA GGTGGTAGTC
AAGGCACTGC CAAAGTATAT AAAGAAAGTA AAAGGTATCG GAGGTTGTAC GCTTTTAGGT
GACGGAAGCA TAAGCCTGAT ATTGGATGTT GCAGGGTTAG TAAGCTAG
 
Protein sequence
MTDNVSREPM LDMFIFETLQ LLDQLEQSLI NSEKESGFES SIDEIFRIMH TIKGSAAMML 
FDDISKLAHS IEDLFFYLRE EKPENVNSTE IIDIVLNGVD FIKNETVKLE NGQEPDGDAS
DLIKEIRDYL GNLKSINNAG SDSPDSESSH TLEVEKDQKY YISSNKAAST PKSHKYEAVL
KFEEQCGMEN IRAFSVIHDL KEIADVNYFY PEDVIDGGGK SENSEIIQKD GFRVVFSTDL
GLDEVKERLS HTILLKSLDV YVINEDLEDI MGDMPDTRET ELKEQELKMD GKANVLNDSS
QASEQNEHSS GRQLSNEKKT GPSADNTASS SKQSVISVNI AKLDKLMDLV GEIVISEAMV
TQNPDLEGLQ LDNFHKAARQ LNKLTNELQD VVMSIRMVPL SMTFQKMNRI VRDMGKKLNK
SIELEIIGEE TEVDKNIIER ISDPLIHLIR NAVDHGLEDP DERVAKGKPP AGKITLEAKN
AGGDVWIFVK DDGRGLDREK ILKKAREAGL IHKPENELTD KEIYSFIFTP GFSTKENVTE
FSGRGVGMDI VSNNISMVGG TIFVDSVPDN GTTISIKLPL TLAIINGMSI KVGKSRYTIP
TISIKESFKV KNEAVITDSE GNEMIMVRGE VYPVLRLHKF YKINTEVTNI NDGIIVMVES
DSRVICIFAD ELLGEQQVVV KALPKYIKKV KGIGGCTLLG DGSISLILDV AGLVS