Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0804 |
Symbol | |
ID | 4810422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 971752 |
End bp | 972324 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640106221 |
Product | MerR family transcriptional regulator |
Protein accession | YP_001037232 |
Protein GI | 125973322 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000127204 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAAGTTA TAAAAGACCG TTATTCTATC ACAGAACTTA GCGGATATCT TAATGTTACC GATCATACCT TAAGATATTA TGAGAGGGAG TTTAATCTGT ATGTCCCAAA GGACAAAAGG GGCAGGAGAT ACTACACTCC GGAGCTTGCC AATATTATGT ACAAGATTAA GACCATGAGG GATGAAGGAC TTGAAATTAA AGCCATAAAA AAAATTCTCC AATCGGAGAA TGTAATAACG GAGCCTCCAC CGGTCGTAAC CGAGGATATT AGTGTGCCTG TTGCAAAGCA TAATTACGGC GAAAACCTCG TTGATATAAA AACTTTCTTT CAGGAATTTG AAAAACAACT GACCAACAGC GTCGCCCTCG AGGTAGAGCT GGCAAAAGAA CACATGACCA ACGAACTTAA TAAAACAAAG CTTGAACTGG GTGCATGTCT CGAAAACAAT ATCAGACGAC TTGAGAGCAA GCTTGACAAG CATTTTGAAA ATGTTGACCG TTCCATATCA ATGTGGAGGG AAAAAAACAA AGACAGCCTC TTAAAACGCC TCAAAAAAAA GGTTTTCAAA TAG
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Protein sequence | MEVIKDRYSI TELSGYLNVT DHTLRYYERE FNLYVPKDKR GRRYYTPELA NIMYKIKTMR DEGLEIKAIK KILQSENVIT EPPPVVTEDI SVPVAKHNYG ENLVDIKTFF QEFEKQLTNS VALEVELAKE HMTNELNKTK LELGACLENN IRRLESKLDK HFENVDRSIS MWREKNKDSL LKRLKKKVFK
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