| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0786 |
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| Symbol | |
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| ID | 4810404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 949649 |
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| End bp | 950731 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640106203 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_001037214 |
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| Protein GI | 125973304 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0410044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAAC TAAACGTCAA TTTACAGGAC AGAAGTTACC CAATTTATAT AAGTACGGAT
TATTCCCAAA TAGGTAAATG CATTCAAAGT GCAAAACTTA CAGGCAAGAT GGTTTTAATA
ACCGATACCA ATGTAGACAA ATACCAGGCG GAAGAATGTG TAAAAGCTTT TTCGGATGCG
GGATATGAAG TAAGTAAGTT TGTTATTCCC GCAGGAGAGG AAAACAAGAA TTTGGATACC
ACCAGGGATA TTTACAAATA CCTGCTTGGT CTGAAACTGG ACAGAAGTGC TACGCTGATG
GCGTTGGGCG GTGGAGTTGT CGGAGATATA ACCGGTTTTG CCGCTGCCAC TTTTCTTCGG
GGAATAAATT TTGTCCAGAT ACCCACGACT CTTCTTGCCC AGTCGGACAG CAGTGTGGGC
GGAAAAGTAG GAGTTGACTT TGAAGGAACC AAAAATATTA TTGGCGCTTT TTACCAGCCG
AAATTTGTAT ATATAAATGT CAATACATTA AAAACCCTGC CCGAAAGGGA ACTTAAGGCA
GGACTTGCAG AAGTGGTCAA GCATGGCGTA ATTATGGATG AAGAGTTTTA TGAATATATA
GACTATAATG TTCACAAAAT ATTAAACCAT GATGAAGCTG TGCTCCAATA TATTGCCAAA
AGGAATTGCT CCATAAAAGC TTCGGTAGTT GAAAAGGACG AAAAAGAAGG GGGCCTTAGG
GCAATCCTGA ACTTTGGCCA CACGATAGGC CATGCAATCG AGACGGTAAT GAATTTTGAG
CTTTTGCACG GAGAATGTGT TTCATTGGGA ATGGTAGGCG CCATGAGGAT GGCCCTGTAT
CTTGAGATGA TTGATGAGCA AAGCGTTAAC CGTGTAAAGA ACACTTTGGA TAAAATCGGG
CTTCCGACAA GGCTTGAAGG CATTGATGTG GACAAGGTTT ACAATCAAAT GTTTTATGAC
AAGAAAATTA AAGGGAGCAA GCTTACCTTT GTACTTCCAA GGAAGAGAAT CGGAGAAGTA
ATACAGTGCA CTATCGATGA TGAAGATTTG ATAAAGAGGG TAATAGCCAG CCTTGGTGAA
TGA
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| Protein sequence | MIKLNVNLQD RSYPIYISTD YSQIGKCIQS AKLTGKMVLI TDTNVDKYQA EECVKAFSDA
GYEVSKFVIP AGEENKNLDT TRDIYKYLLG LKLDRSATLM ALGGGVVGDI TGFAAATFLR
GINFVQIPTT LLAQSDSSVG GKVGVDFEGT KNIIGAFYQP KFVYINVNTL KTLPERELKA
GLAEVVKHGV IMDEEFYEYI DYNVHKILNH DEAVLQYIAK RNCSIKASVV EKDEKEGGLR
AILNFGHTIG HAIETVMNFE LLHGECVSLG MVGAMRMALY LEMIDEQSVN RVKNTLDKIG
LPTRLEGIDV DKVYNQMFYD KKIKGSKLTF VLPRKRIGEV IQCTIDDEDL IKRVIASLGE
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